Job Description P0ADA1 Confidence 13.40% Date Thu Jan 5 11:20:25 GMT 2012 Rank 78 Aligned Residues 53 % Identity 25% Template c2vqqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 4; PDBTitle: structure of hdac4 catalytic domain (a double cysteine-to-2 alanine mutant) bound to a trifluoromethylketone inhbitor Resolution 1.9 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.
Query Sequence		G	L	A	R	L	P	A	L	L	K	Q	H	Q	P	R	W	V	L	V	E	L	G	G	N	D	G	L	R	G	.	.	.	.	.	.	.	.	.	F	Q	P	Q	Q	T	E	Q	T	L	R	Q	I	L	Q	D	V	K	A	A	N	A	E	P	L	L	M	Q
Query Conservation																															.	.	.	.	.	.	.	.	.
Alig confidence																									.						.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																									.																																.	.	.
Template Sequence		F	R	T	V	V	M	P	I	A	S	E	F	A	P	D	V	V	L	V	S	S	G	F	.	D	A	V	E	G	H	P	T	P	L	G	G	Y	N	L	S	A	R	C	F	G	Y	L	T	K	Q	L	M	G	L	A	.	.	.	G	G	R	I	V	L	A	L
Template Known Secondary structure					T											S									.	T	T	B	T	T	S		T	T	S					B													T	T	S	G	.	.	.	G	G
Template Predicted Secondary structure																									.																																.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions