Job Description P0ADA1 Confidence 99.97% Date Thu Jan 5 11:20:25 GMT 2012 Rank 3 Aligned Residues 182 % Identity 23% Template c2o14A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yxim; PDBTitle: x-ray crystal structure of protein yxim_bacsu from bacillus2 subtilis. northeast structural genomics consortium target3 sr595 Resolution 2.10 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.
Predicted Secondary structure																									.	.	.																	.																			.	.												.
Query SS confidence																									.	.	.																	.																			.	.												.
Query Sequence		F	R	A	A	A	A	D	T	L	L	I	L	G	D	S	L	S	A	G	Y	R	M	S	.	.	.	A	S	A	A	W	P	A	L	L	N	D	K	W	Q	S	K	.	T	S	V	V	N	A	S	I	S	G	D	T	S	Q	Q	G	L	A	.	.	R	L	P	A	L	L	K	Q	H	Q	P	.	R	W	V	L	V
Query Conservation																									.	.	.																	.																			.	.												.
Alig confidence																									.	.	.																	.																			.	.												.
Template Conservation
Template Sequence		D	Q	P	V	T	N	R	T	I	Y	V	G	G	D	S	T	V	C	N	Y	Y	P	L	N	S	S	K	Q	A	G	W	G	Q	X	L	P	H	Y	I	D	K	H	T	F	Q	V	R	N	X	A	S	G	G	Q	I	A	R	G	F	R	N	D	G	Q	L	E	A	I	L	K	Y	I	K	P	G	D	Y	F	X	L
Template Known Secondary structure		S	S													T	T	T	S			S	S	T	T	T		S	B							G	G	G	T	S		T	T	T									T	T									S	S							T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		95	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure									.	.																																							.	.	.	.	.	.
Query SS confidence									.	.																																							.	.	.	.	.	.
Query Sequence		E	L	G	G	N	D	G	.	.	L	R	G	F	Q	P	Q	Q	T	E	Q	T	L	R	Q	I	L	Q	D	V	K	A	A	N	A	E	P	L	L	M	Q	I	R	L	P	A	N	Y	.	.	.	.	.	.	G	R	R	Y	N	E	A	F	S	A	I	Y	P	K	L	A	K	E	F	D	V	P	L	L	P	F	F
Query Conservation									.	.																																							.	.	.	.	.	.
Alig confidence									.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	G	I	N	D	T	N	P	K	H	K	E	S	E	A	E	F	K	E	V	X	R	D	X	I	R	Q	V	K	A	K	G	A	D	V	I	L	S	T	P	Q	G	R	A	T	D	F	T	S	E	G	I	H	S	S	V	N	R	W	Y	R	A	S	I	L	A	L	A	E	E	E	K	T	Y	L	I	D	L	N
Template Known Secondary structure					T	G	G	G		G	G	G																				T	T	T												T	T		B		T	T	S		B			T	T	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		167	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		M	E	.	.	.	.	.	.	.	.	.	E	V	Y	L	K	P	Q	W	M	Q	D	D	G	I	H	P	N	R	D	A	Q	P	F	I	A	D	W	M	A	K	Q	L	Q	P	L
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	S	S	A	Y	F	T	S	I	G	P	E	R	T	L	G	L	Y	X	D	G	D	T	L	H	P	N	R	A	G	A	D	A	L	A	R	L	A	V	Q	E	L	K	R	Q
Template Known Secondary structure																		T	T	B		T	T		S	S	S	B	B																		T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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