|   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
P | Y | L | K | K | E | F | T | S | L | T | P | D | D | L | R | V | L | E | L | Y | R | T | P | F | S | D | G | Y | V | F | H | S | M | Q | F | H | I | F | D | L | L | K | S | G | Q | N | V | V | L | S | A | P | T | S | M | G | K | S | A | I | V | D | S | L | L | G | M | . |
. |
. |
. |
. |
G | T | L | K | R | L | V |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   | . | . | . | . | . |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   | . | . | . |   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | D | V | T | P | T | F | D | T | M | G | L | R | E | D | L | L | R | G | I | Y | A | Y | G | F | E | K | . |
. |
. |
P | S | A | I | Q | Q | R | A | I | K | Q | I | I | K | G | R | D | V | I | A | Q | S | Q | S | G | T | G | K | T | A | T | F | S | I | S | V | L | Q | C | L | D | I | Q | V | R | E | T | Q | A | L |
Template Known Secondary structure |   |
|
|
|
|
| S | G | G | G | G |
|
|
|  |  |  |  |  |  |  |  |  |  | T |
|
| S | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T | S |
| S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | V | P | T | V | A | L | A | D | E | T | R | R | R | L | Q | E | R | F | G | D | R | Y | Q | I | I | H | H | S | S | Q | V | C | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | D | Q | A | V | Y | V | L | T | Q | E | R | V | N | E | R | D | . |
. |
. |
. |
. |
D | I | V | D | I | D | L | F | V | I | D | E | F | Y |
Query Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |
|   |
|
|
|   |   |   |   | . | . | . | . | . |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |
|
Template Sequence |   |
I | L | A | P | T | R | E | L | A | V | Q | I | Q | K | G | L | L | A | L | G | D | Y | M | N | V | Q | C | H | A | C | I | G | G | T | N | V | G | E | D | I | R | K | L | D | Y | G | Q | H | V | V | A | G | T | P | G | R | V | F | D | M | I | R | R | R | S | L | R | T | R | A | I | K | M | L | V | L | D | E | A | D |
Template Known Secondary structure |   |
 |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
|
|  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T | T | S | S |
|
| T | T |
|
|  |  |  |  |  | T |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
  |
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | A | F | R | Q | L | K | S | G | D | I | D | H | Q | D | E | R | V | I | E | L | N | I | A | L | S | K | L | L | K | V | S | R | Q | F | Y | L | T | G | P | F | V | N | S | . |
I | R | G | L | E | K | L | G | Y | P | H | T | F | V | S | T | D | F | N |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . |   |   |   |   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |
Template Sequence |   |
E | M | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | K | G | F | K | E | Q | I | Y | D | V | Y | R | Y | L | . |
P | P | A | T | Q | V | V | L | I | S | A | T | L | P | H | E | I | L | E | M | T | N | K | F | M | T | D | P | I | R | I | L | V | K | R |
Template Known Secondary structure |   |
 |  | T | . | . | . | . | . | . | . | . | . | . | . | S | T | T | T |  |  |  |  |  |  |  |  | T | T | S | . |
| T | T |
|  |  |  |  |  |  | S |
|
|
|  |  |  |  | T | T | G | G | G | T |
| S | S |
|  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
  |