Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence99.32%DateWed Jan 25 15:20:57 GMT 2012
Rank127Aligned Residues139
% Identity17%Templated1z3ix2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.... .....120.........130......... 140.........150.........160.
Predicted Secondary structure 



.........









.........




Query SS confidence 














. . . . . . . . .
























. . . . . . . . .





















Query Sequence  VFHSMQFHIFDLLKS. . . . . . . . . GQNVVLSAPTSMGKSAIVDSLLGMG. . . . . . . . . TLKRLVLVVPTVALADETRRRL
Query Conservation       
      
  .........
 
  









 
    
   .........    

 
 

 

  
    
Alig confidence 














.........
























.........










.









Template Conservation   
   
   
  
             
 



 





   
  
  
              


 
 .

  

  
 
Template Sequence  VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPS. SLVRNWYNEV
Template Known Secondary structure  T

TTSSSTT




TTS


TTSS
S
S

.
Template Predicted Secondary structure 


























.
Template SS confidence 















































































   146...150.........160.........170.........180.........190.........200.........210.... .....220....
 
   162.......170... ......180.........190...... ...200.........210.........220..
Predicted Secondary structure 





................











...














Query SS confidence 











. . . . . . . . . . . . . . . .






















. . .

























Query Sequence  QERFGDRYQIIH. . . . . . . . . . . . . . . . HSSQVCHSDQAVYVLTQERVNER. . . DDIVDIDLFVIDEFYKLAFRQLKSGD
Query Conservation     
        ................           
 
 
 


   ...     
 
 



 
 
         
Alig confidence 











................






















...
















.........
Template Conservation                                         
 
 

                 

 



 
.........
Template Sequence  GKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRL. . . . . . . . .
Template Known Secondary structure  GGG


SS



SS

S

TTTTTTS


TTGGG
.........
Template Predicted Secondary structure 






























.........
Template SS confidence 















































































   225....230.........240.........250.........260.........270.........280.........290.....
 
   223......230.........240.........250....
Predicted Secondary structure 











Query SS confidence 































Query Sequence  IDHQDERVIELNIALSKLLKVSRQFYLTGPFV
Query Conservation        
   
                




Alig confidence  ....













..











Template Conservation  ....

  
    

  
..    







Template Sequence  . . . . KNSDNQTYLALNSM. . NAQRRVLISGTP
Template Known Secondary structure  ....
TT
..

S
SS
Template Predicted Secondary structure  ....


..






Template SS confidence 































   296...300......... 310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions