Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence99.89%DateWed Jan 25 15:20:57 GMT 2012
Rank76Aligned Residues188
% Identity14%Templated1wrba1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130........ .140..
Predicted Secondary structure 





























........



Query SS confidence 



































































. . . . . . . .



Query Sequence  PYLKKEFTSLTPDDLRVLELYRTPFSDGYVFHSMQFHIFDLLKSGQNVVLSAPTSMGKSAIVDSLLGM. . . . . . . . GTLK
Query Conservation 
                                 
      
  
 
  









 
    
  ........    
Alig confidence 


























...





































........



Template Conservation        
  
 
   
   
   
   ...   

  


 

 
 



 
 






 
 

 
             
Template Sequence  TNVIENFDELKLDPTIRNNILLASYQR. . . PTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLKTAYP
Template Known Secondary structure 
S


SSGGGS


STTTTTTTTT

S...

TT



TTSSTT



B

Template Predicted Secondary structure 














...





















Template SS confidence 















































































   180.........190.........200...... ...210.........220.........230.........240.........250......
 
   143......150.........160.........170.........180 .........190....... ..200........
Predicted Secondary structure 














.........




.....






Query SS confidence 





































. . . . . . . . .
















. . . . .










Query Sequence  RLVLVVPTVALADETRRRLQERFGDRYQIIHHSSQVCH. . . . . . . . . SDQAVYVLTQERVNERD. . . . . DIVDIDLFVID
Query Conservation   

 
 

 

  
    
   
               .........    
 
 
 


    .....    
 
 


Alig confidence 





































.........
















.....










Template Conservation     
         
                                     
 
 
       
         
  



Template Sequence  KCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLD
Template Known Secondary structure  S
SSTTSS


SSS
SSS

S
TTSB

TT

Template Predicted Secondary structure 
























Template SS confidence 















































































   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   209210.........220.........230.........240 .........250...... ...260.........270..
Predicted Secondary structure 











...







.



Query SS confidence 































. . .















.















Query Sequence  EFYKLAFRQLKSGDIDHQDERVIELNIALSKL. . . LKVSRQFYLTGPFVNS. IRGLEKLGYPHTFVST
Query Conservation 
 
 
               
   
       ...         




  .                
Alig confidence 





...........














...















.















Template Conservation 
 
   ...........       
  

  
        
 
  


    
  
    
  
  
 
Template Sequence  EADRML. . . . . . . . . . . DMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMT
Template Known Secondary structure  T...........TT
SS



GGG
SS


SS
Template Predicted Secondary structure 

...........
















Template SS confidence 



































































   343..... .350.........360.........370.........380.........390.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions