Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence99.87%DateWed Jan 25 15:20:57 GMT 2012
Rank85Aligned Residues165
% Identity16%Templated1wp9a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130...... ...140.........150.........160.........170.....
Predicted Secondary structure 













...













Query SS confidence 





































. . .






































Query Sequence  YVFHSMQFHIFDLLKSGQNVVLSAPTSMGKSAIVDSLL. . . GMGTLKRLVLVVPTVALADETRRRLQERFGDRYQIIHHS
Query Conservation        
      
  
 
  









 
    
...       

 
 

 

  
    
   
          
Alig confidence 














.





















...






































Template Conservation    

 

 
 
   
.  
 

  






 
    
             
 
   
                      
Template Sequence  IQPRIYQEVIYAKCK. ETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVAL
Template Known Secondary structure 


GG.GS


TTS
S
S

SSB
S
GGG
Template Predicted Secondary structure 



.





























Template SS confidence 















































































   8.10.........20.. .......30.........40.........50.........60.........70.........80......
 
   176...180.. .......190....... ..200.........210.........220.........230.........240..
Predicted Secondary structure 






........


.....




















Query SS confidence 






. . . . . . . .














. . . . .












































Query Sequence  SQVCHSD. . . . . . . . QAVYVLTQERVNERD. . . . . DIVDIDLFVIDEFYKLAFRQLKSGDIDHQDERVIELNIALSKLLK
Query Conservation         ........  
 
 
 


    .....    
 
 



 
 
               
   
         
Alig confidence 






........














.....















............
















Template Conservation                   
       
                




 
  ............        
        
Template Sequence  TGEKSPEERSKAWARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRA. . . . . . . . . . . . VGNYAYVFIAREYKRQA
Template Known Secondary structure 
S
S

S
TTS

TTS
STGGG
............STT

Template Predicted Secondary structure 



















............





Template SS confidence 















































































   87..90.........100.........110.........120.........130....... ..140.........150....
 
   243......250...... ...260..... ....270......
Predicted Secondary structure 





....
.






Query SS confidence 













. . . .








.










Query Sequence  VSRQFYLTGPFVNS. . . . IRGLEKLGY. PHTFVSTDFNT
Query Conservation         




  ....         .         
 
Alig confidence 













....








.










Template Conservation      

 



              
 
  
        
Template Sequence  KNPLVIGLTASPGSTPEKIMEVINNLGIEHIEYRSENSP
Template Known Secondary structure  SS

S
S
SSTT



TTST
Template Predicted Secondary structure 


















Template SS confidence 






































   155....160.........170.........180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions