Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence99.60%DateWed Jan 25 15:20:57 GMT 2012
Rank115Aligned Residues119
% Identity18%Templated1tf5a4
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.18

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   289290.........300..... ....310.........320.........330.........340.........350.........360.....
Predicted Secondary structure 



...



















Query SS confidence 
















. . .



























































Query Sequence  NDDKAKLKALGEIAHAC. . . VDATIIYCKSPTVAGLVARELIRLGHGTPTENPHVDWVSEEFDADWDYTVALRNGIGLHF
Query Conservation           
       ...    


  

      
  
                          
   
  

  

Alig confidence 
















...


























............................




Template Conservation       
   
   
         



         
   
    
 ............................   
 
Template Sequence  RTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIP. . . . . . . . . . . . . . . . . . . . . . . . . . . . HQVLN
Template Known Secondary structure  SST

S
TTT

............................

Template Predicted Secondary structure 







............................




Template SS confidence 















































































   409410.........420.........430.........440.........450..... ....460
 
   366...370.........380.........390.........400. ........410.........420.........430.......
Predicted Secondary structure 












........





















Query SS confidence 



































. . . . . . . .



































Query Sequence  GALPRALQQYTADQFNAGKLRFLLCTSTIIEGVNTI. . . . . . . . AKNVVIYDNRDGTRSIDKFTHGNIKGRAGRMGVHFV
Query Conservation 
 
    
  

  
  
 
 







  




........
  


         
      
  




      
Alig confidence 



















..













........






....




















..

Template Conservation        

           
..

 
     



     
       

 .... 
 
     
 

 

 

 
..  
Template Sequence  AKNHEREAQIIEEAGQKGAV. . TIATNMAGRGTDIKLGEGVKELGGLAVVG. . . . TERHESRRIDNQLRGRSGRQG. . DP
Template Known Secondary structure  SS
TTTTSTT
..TTSSTT





TTSGGGTS....SS

SSTTSSGGG..

Template Predicted Secondary structure 







..















....









..

Template SS confidence 















































































   461........470.........480 .........490.........500......... 510.........520.........530 ..
 
   438.440...
Predicted Secondary structure 
Query SS confidence 





Query Sequence  GKIFCL
Query Conservation 
 
   
Alig confidence 





Template Conservation 
     
Template Sequence  GITQFY
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 





   533.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions