Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence99.63%DateWed Jan 25 15:20:57 GMT 2012
Rank112Aligned Residues166
% Identity17%Templated1tf5a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.18

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130...... ...140.........150.........160.........170.....
Predicted Secondary structure 














..













Query SS confidence 






































. .






































Query Sequence  GYVFHSMQFHIFDLLKSGQNVVLSAPTSMGKSAIVDSLL. . GMGTLKRLVLVVPTVALADETRRRLQERFGDRYQIIHHS
Query Conservation         
      
  
 
  









 
    
..       

 
 

 

  
    
   
          
Alig confidence 


















..

















..






































Template Conservation         
  
   
  
 ..

   

 



            
    

 
   

             
   
   
Template Sequence  GMFPFKVQLMGGVALHDGN. . IAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLN
Template Known Secondary structure  S



TTS..

TTS
TTSS
SSTT


Template Predicted Secondary structure 









..












Template SS confidence 















































































   78.80.........90...... ...100.........110.........120.........130.........140.........150.....
 
   176...180.. .......190.... .....200.........210... ......220.........
Predicted Secondary structure 






.......


............








.......








Query SS confidence 






. . . . . . .











. . . . . . . . . . . .


















. . . . . . .















Query Sequence  SQVCHSD. . . . . . . QAVYVLTQERVN. . . . . . . . . . . . ERDDIVDIDLFVIDEFYKL. . . . . . . AFRQLKSGDIDHQDER
Query Conservation         .......  
 
 
 


 ............       
 
 



 
 
.......               
Alig confidence 






.......











............


















.......













..
Template Conservation                 


  
   
  
 
 
 
               





 

 


  
            
..
Template Sequence  LNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQSMTLATI. .
Template Known Secondary structure 
TTS
SSTT
SSGGG






TTTTTT




..
Template Predicted Secondary structure 
































..
Template SS confidence 















































































   156...160.........170.........180.........190.........200.........210.........220.........230...
 
   230.........240.........250.........260.........270...
Predicted Secondary structure 













Query SS confidence 











































Query Sequence  VIELNIALSKLLKVSRQFYLTGPFVNSIRGLEKLGYPHTFVSTD
Query Conservation     
                




                   
Alig confidence  ......





































Template Conservation  ......
 
  
     
 




      
   
  
 
  

Template Sequence  . . . . . . TFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIP
Template Known Secondary structure  ......TTSSS

GGG




Template Predicted Secondary structure  ......













Template SS confidence 











































   356...360.........370.........380.........390...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions