Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence99.86%DateWed Jan 25 15:20:57 GMT 2012
Rank88Aligned Residues147
% Identity18%Templated1rifa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases DNA helicase UvsW
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130...... ...140.........150.........160.........170
Predicted Secondary structure 


















...











Query SS confidence 










































. . .

































Query Sequence  PFSDGYVFHSMQFHIFDLLKSGQNVVLSAPTSMGKSAIVDSLL. . . GMGTLKRLVLVVPTVALADETRRRLQERFGDRYQ
Query Conservation             
      
  
 
  









 
    
...       

 
 

 

  
    
   
     
Alig confidence 










































...

































Template Conservation         

 

   
   
     

   





      
           


 
   
  
              
Template Sequence  SGNKRIEPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRLFSHA
Template Known Secondary structure  TT



S


TTS

SS
SSTS

GG
Template Predicted Secondary structure 




























Template SS confidence 















































































   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   171........180.. .......190........ .200.........210.........220.........230.........240..
Predicted Secondary structure 








......



..



















Query SS confidence 











. . . . . .















. .











































Query Sequence  IIHHSSQVCHSD. . . . . . QAVYVLTQERVNERDD. . IVDIDLFVIDEFYKLAFRQLKSGDIDHQDERVIELNIALSKLLK
Query Conservation              ......  
 
 
 


     ..   
 
 



 
 
               
   
         
Alig confidence 











......















..















...............











.
Template Conservation                      


 
   
             






   ...............            .
Template Sequence  MIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLAT. . . . . . . . . . . . . . . GKSISSIISGLN.
Template Known Secondary structure  G
STT
SSTT


TT
S
TTS
GGGGGGTGGG

...............TTT
T.
Template Predicted Secondary structure 
























...............


.
Template SS confidence 















































































   187..190.........200.........210.........220.........230........ .240.........250
 
   243......250......
Predicted Secondary structure 





Query SS confidence 













Query Sequence  VSRQFYLTGPFVNS
Query Conservation         




  
Alig confidence 













Template Conservation       





   
Template Sequence  NCMFKFGLSGSLRD
Template Known Secondary structure  T


SS

T
Template Predicted Secondary structure 





Template SS confidence 













   251........260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions