Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence99.56%DateWed Jan 25 15:20:57 GMT 2012
Rank117Aligned Residues117
% Identity15%Templated1c4oa1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110..... ....120.........130.........140.........150.........160.........170.....
Predicted Secondary structure 



.....





















Query SS confidence 














. . . . .



























































Query Sequence  FHSMQFHIFDLLKSG. . . . . QNVVLSAPTSMGKSAIVDSLLGMGTLKRLVLVVPTVALADETRRRLQERFGDRYQIIHHS
Query Conservation      
      
  
..... 
  









 
    
       

 
 

 

  
    
   
          
Alig confidence 














.....























.


































Template Conservation 
   
  

  
   
       

 
 





   
      .    


 

 


 
    
        
  
  
Template Sequence  PKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEAL. GRPALVLAPNKILAAQLAAEFRELFPENAVEYFIS
Template Known Secondary structure 

TTTT
S
TTS
.T

SS
TTS


Template Predicted Secondary structure 











.










Template SS confidence 















































































   10.........20.........30.........40.........50... ......60.........70.........80........
 
   176...180... ......190........ .200.........210........
Predicted Secondary structure 







......


..........












Query SS confidence 







. . . . . .














. . . . . . . . . .



















Query Sequence  SQVCHSDQ. . . . . . AVYVLTQERVNERDD. . . . . . . . . . IVDIDLFVIDEFYKLAFRQL
Query Conservation          ...... 
 
 
 


     ..........   
 
 



 
 
     
Alig confidence 







......














..........



















Template Conservation                         
   
   

        
  



 


 
     
Template Sequence  YYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGD
Template Known Secondary structure  GGGTS


GGGT



S


S
GGG
S



Template Predicted Secondary structure 





















Template SS confidence 


























































   8990.........100.........110.........120.........130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions