Job Description P52126 Confidence 99.92% Date Wed Jan 25 15:20:57 GMT 2012 Rank 61 Aligned Residues 166 % Identity 20% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	T	S	L	T	P	D	D	L	R	V	L	E	L	Y	R	T	P	F	S	D	G	Y	V	F	H	S	M	Q	F	H	I	F	D	L	L	K	S	G	Q	N	V	V	L	S	A	P	T	S	M	G	K	S	A	I	V	D	S	L	L	G	M	.	.	.	.	.	.	.	.	.	G	T	L	K	R	L	V	L
Query Conservation																																																																	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.
Template Sequence		E	D	T	S	F	L	V	N	E	N	T	L	K	A	I	K	E	M	G	F	T	N	.	.	.	M	T	E	I	Q	H	K	S	I	R	P	L	L	E	G	R	D	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L	I
Template Known Secondary structure		G	G	G															T	T			B	.	.	.															T									T	T	S																	T	T			G	G	G
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		V	V	P	T	V	A	L	A	D	E	T	R	R	R	L	Q	E	R	F	G	D	R	Y	Q	I	I	H	H	S	S	Q	V	C	H	.	.	.	.	.	.	.	.	.	S	D	Q	A	V	Y	V	L	T	Q	E	R	V	N	E	R	D	.	.	.	.	.	.	D	I	V	D	I	D	L	F	V	I	D	E	F	Y
Query Conservation																																				.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	P	T	R	E	L	A	M	Q	T	F	G	V	L	K	E	L	M	T	H	H	V	H	T	Y	G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	P	G	F	M	Y	K	N	L	Q	C	L	V	I	D	E	A	D
Template Known Secondary structure				S	S															T	T	T			S							S	S	S														S																	T	T				T	T								S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	F	R	Q	L	K	S	G	D	I	D	H	Q	D	E	R	V	I	E	L	N	I	A	L	S	K	L	L	K	V	S	R	Q	F	Y	L	T	G	P	F	V	N	S
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		R	I	L	.	.	.	.	.	.	.	.	.	.	.	D	V	G	F	E	E	E	L	K	Q	I	I	K	L	L	.	P	T	R	R	Q	T	M	L	F	S	A	T	Q	T	R
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.		T	T												S	.		S	S	S							S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		337	.	.												340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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