Job Description P52126 Confidence 98.61% Date Wed Jan 25 15:20:57 GMT 2012 Rank 139 Aligned Residues 142 % Identity 13% Template c3ezkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dna packaging protein gp17; PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal2 structures and cryo-em reconstructions Resolution 34.00 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.																																.	.	.	.	.	.
Query SS confidence																																									.	.	.	.																																.	.	.	.	.	.
Query Sequence		G	Y	V	F	H	S	M	Q	F	H	I	F	D	L	L	K	S	G	Q	N	V	V	L	S	A	P	T	S	M	G	K	S	A	I	V	D	S	L	L	.	.	.	.	G	M	G	T	L	K	R	L	V	L	V	V	P	T	V	A	L	A	D	E	T	R	R	R	L	Q	E	R	F	G	D	.	.	.	.	.	.
Query Conservation																																									.	.	.	.																																.	.	.	.	.	.
Alig confidence																																									.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	Q	L	R	D	Y	Q	R	D	M	L	K	I	M	S	S	K	R	M	T	V	C	N	L	S	R	Q	L	G	K	T	T	V	V	A	I	F	L	A	H	F	V	C	F	N	K	D	K	A	V	G	I	L	A	H	K	G	S	M	S	A	E	V	L	D	R	T	K	Q	A	I	E	L	L	P	D	F	L	Q
Template Known Secondary structure																				S								T	T	S		T															S	S	S								S	S																T	T	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	Q	I	I	H	H	S	S	Q	V	C	H	S	D	Q	A	V	Y	V	L	T	Q	E	R	V	N	E	R	D	D	I	V	D	I	D	L	F	V	I	D	E	F	Y	K	L	A	F	R	Q	L	K	S	G	D	I	D	H	Q	D	E	R	V	I	E	L	N	I	A	L	S	K	L	L	K	V	S	R	Q	F
Query Conservation
Alig confidence																															.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	I	V	E	W	N	K	G	S	I	E	L	D	N	G	S	S	I	G	A	Y	A	S	S	P	D	A	V	.	R	G	N	S	F	A	M	I	Y	I	D	E	C	A	F	I	.	.	.	.	.	.	.	.	.	.	.	.	P	N	F	H	D	S	W	L	A	I	Q	P	V	I	S	S	G	R	R	S	K	I
Template Known Secondary structure					S				T	T					T	T	S														.			S			S						S	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	S	S														S	S	S
Template Predicted Secondary structure																															.																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260													.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		248	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	T	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	T	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions