Job Description P52126 Confidence 98.83% Date Wed Jan 25 15:20:57 GMT 2012 Rank 134 Aligned Residues 116 % Identity 22% Template c3e1sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease v, subunit recd; PDBTitle: structure of an n-terminal truncation of deinococcus radiodurans recd2 Resolution 2.20 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		G	Y	V	F	H	S	M	Q	F	H	I	F	D	L	L	K	S	G	Q	N	V	V	L	S	A	P	T	S	M	G	K	S	A	I	V	D	S	L	L	.	.	G	M	G	T	L	K	R	L	V	L	V	V	P	T	V	A	L	A	D	E	T	R	R	R	L	Q	E	R	F	G	D	R	Y	Q	I	I	H	H	S
Query Conservation																																									.	.
Alig confidence																																									.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	G	L	S	E	E	Q	A	S	V	L	D	Q	L	A	G	H	R	L	V	V	L	T	G	G	P	G	T	G	K	S	T	T	T	K	A	V	A	D	L	A	E	S	L	G	L	E	V	G	L	C	A	P	T	G	K	A	A	R	R	L	G	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T													T	T		S								T	T	S																T	T								S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	V	C	H	S	D	Q	A	V	Y	V	L	T	Q	E	R	V	N	.	.	.	.	.	.	.	.	.	E	R	D	D	I	V	D	I	D	L	F	V	I	D	E	F	Y	K	L	A	F	R	Q	L	K	S	G	D	I	D	H	Q	D	E	R	V	I	E	L	N	I	A	L	S	K	L	L	K	V	S	R	Q
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	R	T	A	S	T	V	H	R	L	L	G	Y	G	P	Q	G	F	R	H	N	H	L	E	P	A	P	Y	D	L	L	I	V	D	E	V	S	M	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	M	L	S	L	L	A	A	V	P	P	G	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	S									T	T			T	T			S		S	S	S	S			S		S							G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.																	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		247	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	L	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	L	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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