 |
Job Description | P52126 | Confidence | 87.39% | Date | Wed Jan 25 15:20:57 GMT 2012 |
Rank | 480 | Aligned Residues | 66 |
% Identity | 15% | Template | c2vb6A_ |
PDB info |
PDB header:motor protein | Chain: A: PDB Molecule:myosin vi; |
PDBTitle: myosin vi (md-insert2-cam, delta insert1) post-rigor state (2 crystal form 2)
|
Resolution | 2.30 Å |
|
 |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | P | Y | L | K | K | E | F | T | S | L | T | P | D | D | L | R | V | L | E | L | Y | R | T | P | F | S | D | G | Y | V | F | H | S | M | Q | F | H | I | F | D | L | L | K | . |
. |
. |
S | G | Q | N | V | V | L | S | A | P | T | S | M | G | K | S | A | I | V | D | S | L | L |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   | . | . | . |   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   | . | . |
|   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
Template Sequence |   |
V | N | P | Y | . |
. |
F | D | I | P | K | I | Y | S | S | E | T | I | K | S | Y | Q | G | K | S | L | G | T | M | P | P | H | V | F | A | I | A | D | K | A | F | R | D | M | K | V | L | K | L | S | Q | S | I | I | V | S | G | E | S | G | A | G | K | T | E | N | T | K | F | V | L |
Template Known Secondary structure |   |
 |
|
| S | . | . | S |
|
| S | S | T | T | S |  |  |  |  |  |  |  | T | T |
|
| B | T | T | B |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|