Job Description P52126 Confidence 99.91% Date Wed Jan 25 15:20:57 GMT 2012 Rank 63 Aligned Residues 168 % Identity 18% Template c2pl3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp Resolution 2.15 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		K	K	E	F	T	S	L	T	P	D	D	L	R	V	L	E	L	Y	R	T	P	F	S	D	G	Y	V	F	H	S	M	Q	F	H	I	F	D	L	L	K	S	G	Q	N	V	V	L	S	A	P	T	S	M	G	K	S	A	I	V	D	S	L	L	G	M	.	.	.	.	.	.	.	.	.	G	T	L	K	R	L
Query Conservation																																																																			.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		I	T	R	F	S	D	F	P	L	S	K	K	T	L	K	G	L	Q	E	A	Q	Y	R	L	.	.	.	V	T	E	I	Q	K	Q	T	I	G	L	A	L	Q	G	K	D	V	L	G	A	A	K	T	G	S	G	K	T	L	A	F	L	V	P	V	L	E	A	L	Y	R	L	Q	W	T	S	T	D	G	L	G	V
Template Known Secondary structure			S	B	G	G	G	S													T	T			B	.	.	.														T	T									T	T	S																	T	T			G	G	G
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																					.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		V	L	V	V	P	T	V	A	L	A	D	E	T	R	R	R	L	Q	E	R	F	G	D	R	Y	Q	I	I	H	H	S	S	Q	V	C	.	.	.	.	.	.	H	S	D	Q	A	V	Y	V	L	T	Q	E	R	V	N	E	R	D	.	.	.	.	.	.	D	I	V	D	I	D	L	F	V	I	D	E	F	Y	K
Query Conservation																																					.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	I	S	P	T	R	E	L	A	Y	Q	T	F	E	V	L	R	K	V	G	K	N	H	D	F	S	A	G	L	I	I	G	G	L	K	H	E	A	E	R	I	N	N	I	N	I	L	V	C	T	P	G	R	L	L	Q	H	M	D	E	T	V	S	F	H	A	T	D	L	Q	M	L	V	L	D	E	A	D	R
Template Known Secondary structure						S	S															T	T	T	S	S																		T	T		S																	S	S				T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	F	R	Q	L	K	S	G	D	I	D	H	Q	D	E	R	V	I	E	L	N	I	A	L	S	K	L	L	K	V	S	R	Q	F	Y	L	T	G	P	F	V	N	S
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	L	D	M	G	F	A	D	T	M	N	A	V	I	E	N	L	.	P	K	K	R	Q	T	L	L	F	S	A	T	Q	T	K
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.			T	T	T										T	S	.		T	T	S							S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		227												.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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