Job Description P52126 Confidence 99.81% Date Wed Jan 25 15:20:57 GMT 2012 Rank 98 Aligned Residues 148 % Identity 19% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	K	A	K	L	K	A	L	G	E	I	A	H	A	C	V	D	A	T	I	I	Y	C	K	S	P	T	V	A	G	L	V	A	R	E	L	I	R	L	G	H	G	T	P	T	E	N	P	H	V	D	W	V	S	E	E	F	D	A	D	W	D	Y	T	V	A	L	R	N	G	I	G	L	H	F	G	A	L	P
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	E	A	K	M	V	Y	L	L	E	C	L	Q	K	T	P	P	P	V	L	I	F	A	E	K	K	A	D	V	D	A	I	H	E	Y	L	L	L	K	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	I	H	G	G	K	D
Template Known Secondary structure			G	G	G										T	T	S		S							S																T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.																													.	460	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	Q	Q	Y	T	A	D	Q	F	N	A	G	K	L	R	F	L	L	C	T	S	T	I	I	E	G	V	N	T	I	A	K	N	V	V	I	Y	D	N	R	D	G	T	R	S	I	D	K	F	T	H	G	N	I	K	G	R	A	G	R	M	G	V	H	F	V	G	K	I	F	C	L	E	E	I	P	E	D
Query Conservation
Alig confidence																																									.	.	.	.																				.	.	.	.	.
Template Conservation																																									.	.	.	.																				.	.	.	.	.
Template Sequence		Q	E	E	R	T	K	A	I	E	A	F	R	E	G	K	K	D	V	L	V	A	T	D	V	A	S	K	G	L	D	F	P	A	I	Q	H	V	I	N	.	.	.	.	Y	D	M	P	E	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	.	.	.	.	.	T	G	I	A	T	T	F	I	N	K	A	C	D
Template Known Secondary structure															T	S		S										T	T							S					.	.	.	.	S	S			S	S									T	T	S			.	.	.	.	.										T	T	S
Template Predicted Secondary structure																																									.	.	.	.																				.	.	.	.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.					.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.						.	.	.	.	530	.	.	.	.	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	Q	E	V	D	I	P	L	G	I	Q	G	I	D	T	P	I	N	L	L	A	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	V	L	M	D	L	K	A	L	L	L	E	A	K	Q	K	V	P	P	V	L	Q	V	L
Template Known Secondary structure															T	T									S	T
Template Predicted Secondary structure
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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