Job Description P52126 Confidence 99.90% Date Wed Jan 25 15:20:57 GMT 2012 Rank 72 Aligned Residues 183 % Identity 16% Template c2oxcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx20; PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp Resolution 1.30 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		E	F	T	S	L	T	P	D	D	L	R	V	L	E	L	Y	R	T	P	F	S	D	G	Y	V	F	H	S	M	Q	F	H	I	F	D	L	L	K	S	G	Q	N	V	V	L	S	A	P	T	S	M	G	K	S	A	I	V	D	S	L	L	G	M	.	.	.	.	.	G	T	L	K	R	L	V	L	V	V	P	T
Query Conservation																																																																	.	.	.	.	.
Alig confidence																								.	.	.																																							.	.	.	.	.
Template Conservation																								.	.	.
Template Sequence		D	F	E	S	L	L	L	S	R	P	V	L	E	G	L	R	A	A	G	F	E	R	.	.	.	P	S	P	V	Q	L	K	A	I	P	L	G	R	C	G	L	D	L	I	V	Q	A	K	S	G	T	G	K	T	C	V	F	S	T	I	A	L	D	S	L	V	L	E	N	L	S	T	Q	I	L	I	L	A	P	T
Template Known Secondary structure			G	G	G	G	T												T	T			S	.	.	.														T	T									T	T	S	S															T	T	S		S								S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		V	A	L	A	D	E	T	R	R	R	L	Q	E	R	F	G	D	R	Y	Q	I	I	H	H	S	S	Q	V	C	H	.	.	.	.	.	.	.	.	.	S	D	Q	A	V	Y	V	L	T	Q	E	R	V	N	E	R	D	.	.	.	.	.	D	I	V	D	I	D	L	F	V	I	D	E	F	Y	K	L	A	F	R
Query Conservation																																.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																		.	.	.	.	.																		.	.
Template Conservation																																																																																.	.
Template Sequence		R	E	I	A	V	Q	I	H	S	V	I	T	A	I	G	I	K	M	E	G	L	E	C	H	V	F	I	G	G	T	P	L	S	Q	D	K	T	R	L	K	K	C	H	I	A	V	G	S	P	G	R	I	K	Q	L	I	E	L	D	Y	L	N	P	G	S	I	R	L	F	I	L	D	E	A	D	K	L	L	.	.
Template Known Secondary structure																T	T	T	S	T	T								T	T	S									T	T	S		S															T	T	S	S		G	G	G							S	S						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		Q	L	K	S	G	D	I	D	H	Q	D	E	R	V	I	E	L	N	I	A	L	S	K	L	L	K	V	S	R	Q	F	Y	L	T	G	P	F	V	.	N	S	I	R	G	L	E	K	L	G	Y	P	H	T	F	V	S	T
Query Conservation																																								.
Alig confidence		.	.	.	.	.	.	.	.	.																														.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	E	G	S	F	Q	E	Q	I	N	W	I	Y	S	S	L	P	A	S	K	Q	M	L	A	V	S	A	T	Y	P	E	F	L	A	N	A	L	T	K	Y	M	R	D	P	T	F	V	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	T	T	S	S											S		S	S								S											T	T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions