Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence87.91%DateWed Jan 25 15:20:57 GMT 2012
Rank462Aligned Residues33
% Identity21%Templatec2hxhC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:kinesin-like protein kif1a; PDBTitle: kif1a head-microtubule complex structure in adp-form
Resolution11.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110....... ..120.........130..
Predicted Secondary structure 






..





Query SS confidence 

















. .














Query Sequence  VFHSMQFHIFDLLKSGQN. . VVLSAPTSMGKSAIV
Query Conservation       
      
  
 
..  









 
 
Alig confidence 

















..














Template Conservation 
        
  

 
    
  

 





 

Template Sequence  VYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTM
Template Known Secondary structure  TTT


STTSS
Template Predicted Secondary structure 












Template SS confidence 


































   73......80.........90.........100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions