Job Description P52126 Confidence 99.91% Date Wed Jan 25 15:20:57 GMT 2012 Rank 66 Aligned Residues 182 % Identity 19% Template c2gxqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:heat resistant rna dependent atpase; PDBTitle: hera n-terminal domain in complex with amp, crystal form 1 Resolution 1.20 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.
Query Sequence		E	F	T	S	L	T	P	D	D	L	R	V	L	E	L	Y	R	T	P	F	S	D	G	Y	V	F	H	S	M	Q	F	H	I	F	D	L	L	K	S	G	Q	N	V	V	L	S	A	P	T	S	M	G	K	S	A	I	V	D	S	L	L	G	M	.	.	.	.	.	.	.	.	G	T	L	K	R	L	V	L	V
Query Conservation																																																																	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation																								.	.	.
Template Sequence		E	F	K	D	F	P	L	K	P	E	I	L	E	A	L	H	G	R	G	L	T	T	.	.	.	P	T	P	I	Q	A	A	A	L	P	L	A	L	E	G	K	D	L	I	G	Q	A	R	T	G	T	G	K	T	L	A	F	A	L	P	I	A	E	R	L	A	P	S	Q	E	R	G	R	K	P	R	A	L	V	L
Template Known Secondary structure			G	G	G	S													T	T			S	.	.	.														T	T									T	T	S																				T	T				S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		V	P	T	V	A	L	A	D	E	T	R	R	R	L	Q	E	R	F	G	D	R	Y	Q	I	I	H	H	S	S	Q	V	C	H	S	.	.	.	.	.	.	.	D	Q	A	V	Y	V	L	T	Q	E	R	V	N	E	R	D	.	.	.	.	.	D	I	V	D	I	D	L	F	V	I	D	E	F	Y	K	L	A	F
Query Conservation																																				.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.																	.	.	.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		T	P	T	R	E	L	A	L	Q	V	A	S	E	L	T	A	V	A	P	H	L	K	V	V	A	V	Y	G	G	T	G	Y	G	K	Q	K	E	A	L	L	R	G	A	D	A	V	V	A	T	P	G	R	A	L	D	Y	L	R	Q	G	V	L	D	L	S	R	V	E	V	A	V	L	D	E	A	D	E	M	L	.
Template Known Secondary structure			S	S																T	T	S							S	S	S		S												S																T	S	S			T	T		S						S						.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		R	Q	L	K	S	G	D	I	D	H	Q	D	E	R	V	I	E	L	N	I	A	L	S	K	L	L	K	V	S	R	Q	F	Y	L	T	G	P	F	V	N	S	.	I	R	G	L	E	K	L	G	Y	P	H	T	F	V	S	T
Query Conservation																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.																.																.
Template Conservation		.	.	.	.	.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	S	M	G	F	E	E	E	V	E	A	L	L	S	A	T	.	P	P	S	R	Q	T	L	L	F	S	A	T	L	P	S	W	A	K	R	L	A	E	R	Y	M	K	N	P	V	L	I	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		T	T											T	S	.		T	T	S							S	S														S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
												158	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions