Return to main results Retrieve Phyre Job Id

Job DescriptionP52126
Confidence94.96%DateWed Jan 25 15:20:57 GMT 2012
Rank241Aligned Residues49
% Identity29%Templatec1w36E_
PDB info PDB header:recombinationChain: E: PDB Molecule:exodeoxyribonuclease v beta chain; PDBTitle: recbcd:dna complex
Resolution3.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140. ........150.........160.....
Predicted Secondary structure 









..............



Query SS confidence 
























. . . . . . . . . . . . . .























Query Sequence  NVVLSAPTSMGKSAIVDSLLGMGTL. . . . . . . . . . . . . . KRLVLVVPTVALADETRRRLQERF
Query Conservation 
  









 
    
     ..............  

 
 

 

  
    
   
Alig confidence 
























..............























Template Conservation    

 







  
  
   

                 

 



  

 


 

   
Template Sequence  ERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNI
Template Known Secondary structure 


TTS
TT
SSTTS
SS


GGGS
Template Predicted Secondary structure 


















Template SS confidence 






























































   18.20.........30.........40.........50.........60.........70.........80
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions