Job Description P52126 Confidence 95.67% Date Wed Jan 25 15:20:57 GMT 2012
Rank 215 Aligned Residues 52
% Identity 15% Template c1sxjD_
PDB info
PDB header: replicationChain: D: PDB Molecule: activator 1 41 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
87 . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . .
. . . 120 . . . . . . . . . 130 . . . . . . . .
Predicted Secondary structure  
. . .
Query SS confidence  
.
.
.
Query Sequence  
V L E L Y R T P F S D G Y V F H S M Q F H I F D L L K S G Q .
.
.
N V V L S A P T S M G K S A I V D S L L G M
Query Conservation  
                                                      . . .                  
Alig confidence  
. . .
Template Conservation  
                                                               
Template Sequence  
W V E K Y R P K N L D E V T A Q D H A V T V L K K T L K S A N L P H M L F Y G P P G T G K T S T I L A L T K E
Template Known Secondary structure  
T S S T T T S T T T T T T S T T S S
Template Predicted Secondary structure  
Template SS confidence  
   
27 . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]