Job Description P52126 Confidence 100.00% Date Wed Jan 25 15:20:57 GMT 2012 Rank 12 Aligned Residues 364 % Identity 17% Template c1gl9B_ PDB info PDB header:topoisomerase Chain: B: PDB Molecule:reverse gyrase; PDBTitle: archaeoglobus fulgidus reverse gyrase complexed with adpnp Resolution 3.2 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		K	E	F	T	S	L	T	P	D	D	L	R	V	L	E	L	Y	R	T	P	F	S	D	G	Y	V	F	H	S	M	Q	F	H	I	F	D	L	L	K	S	G	Q	N	V	V	L	S	A	P	T	S	M	G	K	S	A	I	V	D	S	L	L	.	.	G	M	G	T	L	K	R	L	V	L	V	V	P	T	V	A
Query Conservation																																																																.	.
Alig confidence																																																																.	.
Template Conservation
Template Sequence		K	R	S	L	C	L	F	P	E	D	F	L	L	K	E	F	V	E	F	F	R	K	C	V	G	E	P	R	A	I	Q	K	M	W	A	K	R	I	L	R	K	E	S	F	A	A	T	A	P	T	G	V	G	K	T	S	F	G	L	A	M	S	L	F	L	A	L	K	G	K	R	C	Y	V	I	F	P	T	S	L
Template Known Secondary structure					S	S			T	T															T		S														T	T									B	T	S															T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.							170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																		.
Query SS confidence																			.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																		.
Query Sequence		L	A	D	E	T	R	R	R	L	Q	E	R	F	G	D	R	Y	.	.	.	.	.	.	Q	I	I	H	H	S	S	Q	V	C	H	.	.	.	.	.	.	.	.	.	S	D	Q	A	V	Y	V	L	T	Q	E	R	V	N	E	R	D	.	D	I	V	D	I	D	L	F	V	I	D	E	F	Y	K	L	A	F	R
Query Conservation																			.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																		.
Alig confidence																			.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		L	V	I	Q	A	A	E	T	I	R	K	Y	A	E	K	A	G	V	G	T	E	N	L	I	G	Y	Y	H	G	R	I	P	K	R	E	K	E	N	F	M	Q	N	L	R	N	F	K	I	V	I	T	T	T	Q	F	L	S	K	H	Y	R	E	L	G	H	F	D	F	I	F	V	D	D	V	D	A	I	L	K	A
Template Known Secondary structure															T	T	T					T	T	T						S												T	T	T	T	S		S													S	S	S	S				S					S		S					T	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	K	S	G	D	I	D	H	Q	D	E	R	V	I	E	L	N	I	A	L	S	K	L	L	K	V	S	R	Q	F	Y	L	T	G	P	F	V	N	S	I	R	G	L	E	K	L	G	Y	P	H	T	F	V	S	T	D	F	N	T	V	A	L	D	V	K	T	F	G	I	K	A	N	D	D	K	A	K	L	K
Query Conservation
Alig confidence																										.																																																		.	.	.	.
Template Conservation																										.																																																		.	.	.	.
Template Sequence		S	K	N	V	D	K	L	L	H	L	L	G	F	H	Y	D	L	K	T	K	S	W	V	G	.	E	A	R	G	C	L	M	V	S	T	A	T	A	K	K	G	K	K	A	E	L	F	R	Q	L	L	N	F	D	I	G	S	S	R	I	T	V	R	N	V	E	D	V	A	V	N	D	E	S	.	.	.	.	I	S
Template Known Secondary structure													T				B	T	T	T	T	B				.				S							B	S	S				T	T	T								S					B	S													S				.	.	.	.	T	T
Template Predicted Secondary structure																										.																																																		.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	E	I	A	H	A	C	V	D	A	T	I	I	Y	C	K	S	P	T	V	A	G	L	V	A	R	E	L	I	R	L	G	H	G	T	P	T	E	N	P	H	V	D	W	V	S	E	E	F	D	A	D	W	D	Y	T	V	A	L	R	N	G	I	G	L	H	F	G	A	L	P	R	A	L	Q	Q	Y	T
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	S	S	I	L	E	K	L	G	T	G	G	I	I	Y	A	R	T	G	E	E	A	E	E	I	Y	E	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	K	F	R	I	G	I	V	T	A	T	K	K	G	D
Template Known Secondary structure		T	T					T	T	S		S							S	S									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S				B		S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																																			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	Q	F	N	A	G	K	L	R	F	L	L	C	.	.	.	.	T	S	T	I	I	E	G	V	N	T	I	.	.	A	K	N	V	V	I	Y	D	N	R	D	G	T	R	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	K	F	V	E	G	E	I	D	H	L	I	G	T	A	H	Y	Y	G	T	L	V	R	G	L	D	L	P	E	R	I	R	F	A	V	F	V	G	C	P	S	F	R	V	T	I	E	D	I	D	S	L	S	P	Q	M	V	K	L	L	A	Y	L	Y	R	N	V	D	E	I	E	R	L	L	P	A	V	E	R
Template Known Secondary structure							T	T	S		S												T	G	G	G	T			T	T	T								S								T	T	T		S	S	S		G	G	G						S	S			T	T	T	T					S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
																																			418	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	F	T	H	G	N	I	K	G	R	A	G	R	.	.	M	G	V	H	F	V	G	K	I	F	C	L	E	E	I	P	.	.	.	.	.	E	D	N	L	N	Q	E	V	D	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.
Template Conservation
Template Sequence		H	I	D	E	V	R	E	I	L	K	K	V	M	G	K	E	R	P	Q	A	K	D	V	V	V	R	E	G	E	V	I	F	P	D	L	R	T	Y	I	Q	G	S	G	R	T	S	R	L	F	A	G	G	L	T	K	G	A	S	F	L	L	E	D	D	S	E	L	L	S	A	F	I	E	R	A	K	L	Y	D	I
Template Known Secondary structure			S										S	S	S	S						S	S	S	B		S	S	S																T	T					T	T												S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	I	Q	G	I	D	T	P	I	N	L	L	A	S	V	Q	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	K	S	I	D	E	V	D	F	E	K	L	S	R	E	L	D	E	S
Template Known Secondary structure							S		S		T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.