Job Description P0ABQ0 Confidence 79.49% Date Wed Jan 25 15:20:22 GMT 2012 Rank 406 Aligned Residues 203 % Identity 14% Template c3t07D_ PDB info PDB header:transferase/transferase inhibitor Chain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid Resolution 3.30 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		V	S	T	I	C	L	A	T	P	A	P	V	A	V	L	P	A	M	N	Q	Q	M	Y	R	A	A	A	T	Q	H	N	L	E	V	L	A	S	R	G	L	L	I	W	G	P	D	S	G	S	Q	A	C	G	D	I	G	P	G	R	M	L	.	D	P	L	T	I	V	D	M	A	V	A	H	F	S	P	V	N	D
Query Conservation																																																															.
Alig confidence																																.	.																														.
Template Conservation																																.	.
Template Sequence		L	I	R	Q	C	N	K	L	G	K	P	V	I	T	A	T	Q	M	L	D	S	M	Q	R	N	P	R	A	T	R	.	.	A	E	A	S	D	V	A	N	A	I	Y	D	G	T	D	A	V	M	L	S	G	E	T	A	A	G	L	Y	P	E	E	A	V	K	T	M	R	N	I	A	V	S	A	E	A	A	Q	D
Template Known Secondary structure								T	T	T							S	S	S	S	G	G	G	G	T	S	S	S				.	.													T		S					S					T		S																			T
Template Predicted Secondary structure																																.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	H	L	N	I	M	I	T	A	G	P	T	R	E	P	L	D	P	V	R	Y	I	S	N	H	S	S	G	K	M	G	F	A	I	A	A	A	A	A	R	R	G	A	N	V	T	L	V	S	G	P	V	S	L	P	T	P	P	F	V	K	R	V	D	V	M	T	A	L	E	M	E	A	A	V	N	A	S	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	K	L	.	.	.	.	.	.	.	.	.	.	.	L	S	D	R	T	K	L	V	E	T	S	L	V	N	A	I	G	I	S	V	A	H	T	A	L	N	L	N	V	K	A	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	E	S	G	S	T	A	R	T	I	S	K	Y	R
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.								S				T	T	T														T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S								T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.												.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.																	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Q	N	I	F	I	G	C	A	A	V	A	D	Y	R	A	A	T	V	A	P	E	K	I	K	K	Q	A	T	Q	G	D	E	L	T	I	K	M	V	K	N	P	D	I	V	A	G	V	A	A	L	K	D	H	R	P	Y	V	V	G	F	A	A	E	T	N	N	V	E	E	Y	A	R	Q	K	R	I	R	K
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	S	D	I	I	A	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	E	E	T	A	R	Q	C	S	I	V	W	G	V	Q	P	V	V	K	K	G	R	K	S	T	D	A	L	L	N	N	A	V	A	T	A	V	E	T
Template Known Secondary structure			S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T	T	S	T	T											S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.																																.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		346	.					.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.
Predicted Secondary structure				.	.	.	.																		.	.
Query SS confidence				.	.	.	.																		.	.
Query Sequence		N	L	.	.	.	.	D	L	I	C	A	N	D	V	S	Q	P	T	Q	G	F	N	S	.	.	D	N	N	A	L	H	L	F	W
Query Conservation				.	.	.	.																		.	.
Alig confidence				.	.	.	.							.	.	.	.								.	.
Template Conservation														.	.	.	.
Template Sequence		G	R	V	T	N	G	D	L	I	I	I	T	.	.	.	.	A	G	V	P	T	G	E	T	G	T	T	N	M	M	K	I	H	L
Template Known Secondary structure		S	S			T	T							.	.	.	.			S	S	S	T	T		S	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.					.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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