Job Description P0ABQ0 Confidence 83.28% Date Wed Jan 25 15:20:22 GMT 2012 Rank 378 Aligned Residues 113 % Identity 19% Template c3s3tD_ PDB info PDB header:chaperone Chain: D: PDB Molecule:nucleotide-binding protein, universal stress protein uspa PDBTitle: universal stress protein uspa from lactobacillus plantarum Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40																								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																												.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	I	V	L	G	V	S	G	G	I	A	A	Y	K	T	P	E	L	V	R	R	L	R	D	R	.	G	A	D	V	R	V	A	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	K	A	F	I	T	P	L	S	L	Q	A	V	S	G	Y	P	V	S
Query Conservation																												.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	I	L	V	P	V	D	S	S	D	A	A	Q	A	A	F	T	E	A	V	N	I	A	Q	R	H	Q	A	N	L	T	A	L	Y	V	V	D	D	S	A	Y	H	T	P	A	L	D	P	V	L	S	E	L	L	D	A	E	A	A	H	A	K	D	A	X	R	Q	R	Q	Q	F	V	A	T	T	S	A	P	N
Template Known Secondary structure										S	S																		T																	G	G	G																												T	S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		D	S	L	L	D	P	A	A	E	A	A	M	G	H	I	E	L	G	K	W	A	.	.	.	D	L	V	I	L	A	P	A	T	A	D	L	I	A	R	V	A	A	G	M	A	N	D	L	V	S	T	I	C	L	A	T	P	A	P	V	A	V	L
Query Conservation																							.	.	.
Alig confidence																							.	.	.																				.	.	.
Template Conservation																																													.	.	.
Template Sequence		L	K	T	E	I	S	Y	G	I	P	K	H	T	I	E	D	Y	A	K	Q	H	P	E	I	D	L	I	V	L	G	A	T	G	T	N	S	P	H	R	V	A	V	G	.	.	.	S	T	T	S	Y	V	V	D	H	A	P	C	N	V	I	V	I
Template Known Secondary structure									S													S	T	T								S			S	S		T	T	T		S	S		.	.	.											S	S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions