Job Description P0ABQ0 Confidence 97.34% Date Wed Jan 25 15:20:22 GMT 2012 Rank 23 Aligned Residues 166 % Identity 17% Template c3qvoA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nmra family protein; PDBTitle: structure of a rossmann-fold nad(p)-binding family protein from2 shigella flexneri. Resolution 2.30 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																										.										.
Query SS confidence																																										.										.
Query Sequence		H	L	N	I	M	I	T	A	G	P	T	R	E	P	L	D	P	V	R	Y	I	S	N	H	S	S	G	K	M	G	F	A	I	A	A	A	A	A	R	R	.	G	A	N	V	T	L	V	S	G	.	P	V	S	L	P	T	P	P	F	V	K	R	V	D	V	M	T	A	L	E	M	E	A	A	V	N	A	S	V
Query Conservation																																										.										.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.										.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	N	V	L	I	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	I	A	R	H	V	I	N	Q	L	A	D	K	Q	T	I	K	Q	T	L	F	A	R	Q	P	A	K	I	H	K	P	Y	P	T	N	S	Q	I	I	X	G	D	V	L	N	H	A	A	L	K	Q	A	X
Template Known Secondary structure									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S											T	T		T	T								S	S	G	G	G	S		S	S			T	T								T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.																	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		Q	Q	Q	N	I	F	I	G	C	A	A	V	A	D	Y	R	A	A	T	V	A	P	E	K	I	K	K	Q	A	T	Q	G	D	E	L	T	I	K	M	V	K	N	P	D	I	V	A	G	V	A	A	L	K	D	H	R	P	Y	V	V	G	F	A	A	E	T	N	.	.	N	V	E	E	Y	A	R	Q	K	R	I
Query Conservation																																																																					.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	Q	D	I	V	Y	A	N	L	T	G	E	D	L	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	N	S	V	I	A	A	X	K	A	C	D	V	K	R	L	I	F	V	L	S	L	G	I	G	E	P	L	K	P	F	R	R	A	A	D	A	I	E
Template Known Secondary structure		T	T		S								S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T														G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	N	L	D	L	I	C	A	N	D	V	S	Q	P	T	Q	G	F	N	S	D	N	N	A	L	H	L	F	W	Q	D	G	D	K	V	L	P	L	E	R	K	E	L	L	G	Q	L	L	L	D	E	I
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		A	S	G	L	E	Y	T	I	L	R	.	.	.	.	P	A	W	L	T	D	E	D	I	I	D	Y	E	L	T	S	R	N	E	P	F	K	G	T	I	V	S	R	K	S	V	A	A	L	I	T	D	I	I
Template Known Secondary structure		T	S		S							.	.	.	.								S									T	T	S			S		S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions