 |
Job Description | P0ABQ0 | Confidence | 95.07% | Date | Wed Jan 25 15:20:22 GMT 2012 |
Rank | 239 | Aligned Residues | 83 |
% Identity | 13% | Template | c3i4fD_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; |
PDBTitle: structure of putative 3-oxoacyl-reductase from bacillus thuringiensis
|
Resolution | 2.39 Å |
|
 |
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | |
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
L | N | I | M | I | T | A | G | P | T | R | E | P | L | D | P | V | R | Y | I | S | N | H | S | S | G | K | M | G | F | A | I | A | A | A | A | A | R | R | G | A | N | V | T | L | V | S | G | P | V | S | . |
. |
. |
. |
. |
. |
. |
. |
L | P | T | P | P | F | V | K | R | V | D | V | M | . |
. |
. |
. |
. |
T | A | L |
Query Conservation |   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |
|   |
|   | . | . | . | . | . |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | H | A | L | I | T | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | K | G | L | G | K | Q | V | T | E | K | L | L | A | K | G | Y | S | V | T | V | T | Y | H | T | T | A | M | E | T | M | K | E | T | Y | K | D | V | E | E | R | L | Q | F | V | Q | A | D | V | T | K | K | E | D | L | H |
Template Known Secondary structure |   |
|  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | T | G | G | G | G | G | G |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
256 | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | E | A | A | V | N | A | S | V | Q | Q | Q | N | I | F | I | G | C | A | A | V | A | D | Y | R | A | A | T | V | A | P |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | I | V | E | E | A | M | S | H | F | G | K | I | D | F | L | I | N | N | A | G | P | Y | V | F | E | R | K | K | L | V | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |
|
|
|
|
|
|
| S |
|
|
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|