Job Description P0ABQ0 Confidence 74.63% Date Wed Jan 25 15:20:22 GMT 2012 Rank 449 Aligned Residues 116 % Identity 12% Template c3fg9B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein of universal stress protein uspa family; PDBTitle: the crystal structure of an universal stress protein uspa2 family protein from lactobacillus plantarum wcfs1 Resolution 1.47 Å

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.																	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure														.	.																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	A	G	K	K	I	V	L	G	V	S	.	.	G	G	I	A	A	Y	K	T	P	E	L	V	R	R	L	R	D	R	.	G	A	D	V	R	V	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	A	A	K	A	F	I	T	P	L	S	L	Q	A	V	S	G	Y	P	V	S	D
Query Conservation														.	.																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	V	Y	R	R	I	L	L	T	V	D	E	D	D	N	T	S	S	E	R	A	F	R	Y	A	T	T	L	A	H	D	Y	D	V	P	L	G	I	C	S	V	L	E	S	E	P	S	K	I	Q	A	K	R	K	H	V	E	D	V	V	A	E	Y	V	Q	L	A	E	Q	R	G	V	N	Q	V	E	P	L	V
Template Known Secondary structure						S	S							S																					T																																						T		S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	D	P	A	A	E	A	A	M	G	H	I	E	L	G	K	W	A	D	L	V	I	L	A	P	A	T	A	D	L	I	A	R	V	A	A	G	M	A	N	D	L	V	S	T	I	C	L	A	T	P	A	P	V	A	V	L
Query Conservation
Alig confidence																																						.			.	.	.
Template Conservation																																						.			.	.	.
Template Sequence		Y	E	G	G	D	V	D	D	V	I	L	E	Q	V	I	P	E	F	K	P	D	L	L	V	T	G	A	D	T	E	F	P	H	S	K	I	.	A	G	.	.	.	A	I	G	P	R	L	A	R	K	A	P	I	S	V	I	V	V
Template Known Secondary structure					S									T								S						T	T				T	T		S	S	.		S	.	.	.											S	S
Template Predicted Secondary structure																																						.			.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions