Job Description P0ABQ0 Confidence 93.27% Date Wed Jan 25 15:20:22 GMT 2012 Rank 275 Aligned Residues 165 % Identity 12% Template c3ew7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo0794 protein; PDBTitle: crystal structure of the lmo0794 protein from listeria2 monocytogenes. northeast structural genomics consortium3 target lmr162. Resolution 2.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	S	G	G	I	A	A	Y	K	T	P	E	L	V	R	R	L	R	D	R	G	A	D	V	R	V	A	M	T	E	A	A	K	A	F	I	T	P	L	S	L	Q	A	V	S	G	Y	P	V	S	D	S	L	L	D	P	A	A	E	A	A	M	G	H	I	E	L	G	K	W	A	D	L	V	I	L	A	P
Query Conservation
Alig confidence												.																					.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation												.																					.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		I	G	I	I	G	A	T	G	R	A	.	G	S	R	I	L	E	E	A	K	N	R	G	H	E	V	T	A	I	V	R	.	.	.	.	.	.	.	N	A	G	K	I	T	Q	T	H	K	D	I	N	I	L	Q	K	.	.	.	.	.	D	I	F	D	L	T	L	S	D	L	S	D	Q	N	V	V	V	D	A	Y
Template Known Secondary structure						T	T	T	S			.											T	T								S	.	.	.	.	.	.	.		S								S	S	S						.	.	.	.	.		G	G	G							T	T		S
Template Predicted Secondary structure												.																					.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		A	T	A	D	L	I	A	R	V	A	A	G	M	A	N	D	L	V	S	T	I	C	L	A	T	P	A	P	V	A	V	L	.	.	.	.	.	P	A	M	N	Q	Q	M	Y	R	A	A	A	T	Q	H	N	L	E	V	L	A	S	R	G	L	L	I	W	G	P	D	S	G	S	Q	A	C	G	D	I	G	P	G
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.																																	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		G	I	S	P	D	E	A	E	K	H	V	T	S	L	D	H	L	I	S	V	L	N	G	T	V	S	P	R	L	L	V	V	G	G	A	A	A	P	Y	Y	P	T	A	R	A	Q	A	K	Q	L	E	H	L	K	S	H	Q	A	E	F	S	W	T	Y	I	S	P	S	A	.	.	.	.	.	.	X	F	E	P	G
Template Known Secondary structure			S	S	T	T	T	T	T	S														S			S	S													S															T	T	T	T	T	S								S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	D	P	L	T	I	V	D	M	A	V	A	H	F	S	P	V	N	D	L	K	H	L	N	I	M	I	T	A
Query Conservation
Alig confidence				.																.
Template Conservation				.																.
Template Sequence		F	I	.	S	X	E	D	Y	A	I	A	V	L	D	E	I	E	R	.	P	N	H	L	N	E	H	F	T	V	A	G
Template Known Secondary structure				.															S	.		S		T	T	S
Template Predicted Secondary structure				.																.
Template SS confidence
		184	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions