 |
Job Description | P0ABQ0 | Confidence | 69.54% | Date | Wed Jan 25 15:20:22 GMT 2012 |
Rank | 492 | Aligned Residues | 59 |
% Identity | 19% | Template | c2omeA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:c-terminal-binding protein 2; |
PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h)
|
Resolution | 2.80 Å |
|
 |
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | M | G | F | A | I | A | A | A | A | A | R | R | G | A | N | V | T | L | V | S | G | P | V | S | L | P | T | P | P | F | V | K | R | V | D | V | M | T | A | L | E | M | E | A | A | V | N | A | S | V | Q | Q | Q | N | I | F | I | G | C | A | A | V | A | D |
Query Conservation |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   | . | . | . | . | . | . | . |   |
|
|
|   |
|   |   |
|
|
|   |
Template Sequence |   |
G | R | T | G | Q | A | V | A | V | R | A | K | A | F | G | F | S | V | I | F | Y | D | P | Y | L | Q | D | G | I | E | R | S | L | G | V | Q | R | V | Y | T | L | Q | D | L | L | Y | Q | . |
. |
. |
. |
. |
. |
. |
S | D | C | V | S | L | H | C | N | L | N | E |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  | G | G | G | T |
|  |  |  |  |  |
| T | T | S |
| T | T |  |  |  |  | T | T |
|  |  |
| S | S |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
| S |  |  |  |  |
|
|
|
|
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 240 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|