Job Description P0ABQ0 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 2 Aligned Residues 201 % Identity 27% Template c2gk4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: the crystal structure of the dna/pantothenate metabolism flavoprotein2 from streptococcus pneumoniae Resolution 1.83 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		N	I	M	I	T	A	G	P	T	R	E	P	L	D	P	V	R	Y	I	S	N	H	S	S	G	K	M	G	F	A	I	A	A	A	A	A	R	R	G	A	N	V	T	L	V	S	G	P	V	S	L	P	T	P	P	.	.	F	V	K	R	V	D	V	M	T	A	L	E	M	E	A	A	V	N	A	S	V	Q	Q
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		K	I	L	V	T	S	G	G	T	S	E	A	I	D	S	V	R	S	I	T	N	H	S	T	G	H	L	G	K	I	I	T	E	T	L	L	S	A	G	Y	E	V	C	L	I	T	T	K	R	A	L	K	P	E	P	H	P	N	L	S	I	R	E	I	T	N	T	K	D	L	L	I	E	X	Q	E	R	V	Q	D
Template Known Secondary structure								S	B					S	S	S	S																						T	T									T	T	S							T	T								S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.																					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	I	F	I	G	C	A	A	V	A	D	Y	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	A	P	E	K	I	K	K	Q	A	T	Q	G	D	E	L	T	I	K	M	V	K	N	P	D	I	V	A	G	V	A	A	L	K	D	H	R	P	Y	V	V	G	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																								.
Template Conservation																																													.	.	.																								.
Template Sequence		Y	Q	V	L	I	H	S	X	A	V	S	D	Y	T	P	V	Y	X	T	G	L	E	E	V	Q	A	S	S	N	L	K	E	F	L	S	K	Q	N	H	Q	A	K	I	.	.	.	S	S	T	D	E	V	Q	V	L	F	L	K	K	T	P	K	I	I	S	L	V	K	E	.	W	N	P	T	I	H	L	I	G	F
Template Known Secondary structure			S						S	B			S																S		G	G	G	G	G	G			G	G	G				.	.	.		T	T		S																			.			T	T	S
Template Predicted Secondary structure																																													.	.	.																								.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.
		328	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		A	A	E	T	N	.	.	.	.	N	V	E	E	Y	A	R	Q	K	R	I	R	K	N	L	D	L	I	C	A	N	D	V	S	Q	P	T	Q	G	F	N	S	D	N	N	A	L	H	L	F	W	Q	D	G	D	K	V	L	P	L	E	R	K	E	L	L	G	Q	L	L	L	D	E	I	V	T	R	Y
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.																										.	.	.	.																					.	.
Template Conservation																																				.	.	.	.																					.	.
Template Sequence		K	L	L	V	D	V	T	E	D	H	L	V	D	I	A	R	K	S	L	I	K	N	Q	A	D	L	I	I	A	N	D	L	T	Q	.	.	.	.	I	S	A	D	Q	H	R	A	I	F	V	E	K	N	Q	L	Q	T	V	Q	.	.	T	K	E	E	I	A	E	L	L	L	E	K	I	Q	A	Y	H
Template Known Secondary structure					S	S																		T		S							G	G	G	.	.	.	.	B		S	S		B							S	S						S	.	.	S														T	T
Template Predicted Secondary structure																																				.	.	.	.																					.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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