 |
Job Description | P0ABQ0 | Confidence | 82.31% | Date | Wed Jan 25 15:20:22 GMT 2012 |
Rank | 390 | Aligned Residues | 69 |
% Identity | 26% | Template | c2g04B_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:probable fatty-acid-coa racemase far; |
PDBTitle: crystal structure of fatty acid-coa racemase from mycobacterium2 tuberculosis h37rv
|
Resolution | 2.70 Å |
|
 |
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | D | P | V | R | Y | I | S | N | H | S | S | G | K | M | G | F | A | I | A | A | A | A | A | R | R | G | A | N | V | T | L | V | S | G | P | V | S | L | P | T | P | . |
. |
. |
. |
. |
. |
. |
. |
P | F | V | K | R | V | D | V | M | T | A | L | E | M | E | A | A | V | N | A | S | V | Q | Q | Q | N | I | F | I |
Query Conservation |   |
  |
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|
| . |
|   |   |   |   |
|
|
|   |
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
| . | . | . | . |
|
|
|   |   |
|   |   |
|   |   |   |
|
|
|
|
|
Template Sequence |   |
P | L | A | G | V | K | V | I | E | . |
L | G | G | I | G | P | G | P | H | A | G | M | V | L | A | D | L | G | A | D | V | V | R | V | R | R | P | G | G | L | T | M | P | S | E | D | R | D | L | L | H | R | G | K | R | I | V | D | L | . |
. |
. |
. |
D | V | P | Q | A | M | L | E | L | A | A | K | A | D | V | L | L |
Template Known Secondary structure |   |
T | T | T | T |
|  |  |  |  | . |
|
|
| S | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T |
|
|
| S | S |
| G | G | G |
| T | T | S | T | T |
|  |  |  |  |
| . | . | . | . |
|
|
|
| T | T |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | |
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
273 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
G | C |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
  |
|
Template Sequence |   |
D | C |
Template Known Secondary structure |   |
 |
|
Template Predicted Secondary structure |   |
 |
|
Template SS confidence |   |
|
|
  |   |
84 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|