Job Description P0ABQ0 Confidence 70.84% Date Wed Jan 25 15:20:22 GMT 2012 Rank 471 Aligned Residues 53 % Identity 17% Template c2dg2D_ PDB info PDB header:protein binding Chain: D: PDB Molecule:apolipoprotein a-i binding protein; PDBTitle: crystal structure of mouse apolipoprotein a-i binding2 protein Resolution 2.45 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	T	I	V	D	M	A	V	A	H	F	S	P	V	N	.	D	L	K	H	L	N	I	M	I	T	A	G	P	T	R	E	P	L	D	P	V	R	Y	I	S	N	H	S	S	G	K	M	G	F	A	I	A	A	A	A	A	R	R	G	A	N	V	T	L	V	S
Query Conservation																	.
Alig confidence																	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	C	A	T	A	I	A	K	A	Y	P	P	T	S	X	S	K	S	P	P	T	V	L	V	I	C	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	G	G	D	G	L	V	C	A	R	H	L	K	L	F	G	Y	Q	P	T	I	Y	Y
Template Known Secondary structure												S		G	G	G	S	S	S	S	S									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.														.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions