Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence98.38%DateThu Jan 5 10:57:49 GMT 2012
Rank107Aligned Residues146
% Identity19%Templated2i3ba1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180.........190.........200.....
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Query Sequence  NPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSER. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYV
Template Known Secondary structure 

S

SS
TT




TTSSTTS






SSS

SSSS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   206...210.........220.........230.........240.........250.........260.........270.........280....
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Query Sequence  . FVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKS
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Template Sequence  VDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKM. . . ELFSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIR
Template Known Secondary structure 
TTTTTTT






SS






STT...TTT
S
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TT
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   82.......90.........100.........110....... ..120.........130.........140.........150........
 
   285....290.........300.........310....
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Query Sequence  RFGWGLTVAIEPPELETRVAILMKKADEND
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Template Conservation           
   

  
   
   
   
Template Sequence  NRKDVKVFNVTKENRNHLLPDIVTCVQSSR
Template Known Secondary structure  TT

S

SSSGGGTTS
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   159160.........170.........180........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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