Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence96.30%DateThu Jan 5 10:57:49 GMT 2012
Rank385Aligned Residues96
% Identity18%Templated2fz4a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180.........190.........200.........210........ .220
Predicted Secondary structure 

















.........................
Query SS confidence 




















































. . . . . . . . . . . . . . . . . . . . . . . . .

Query Sequence  NPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA. . . . . . . . . . . . . . . . . . . . . . . . . IE
Query Conservation    


 
  
 


 

 


                                .........................  
Alig confidence 


























....





















.........................

Template Conservation     

   

 


             .... 
 
                                      
      
Template Sequence  KRGCIVLPTGSGKTHVAMAAINELSTP. . . . TLIVVPTLALAEQWKERLGIFGEEYVGEFSGRIKELKPLTVSTYDSAYV
Template Known Secondary structure  SSSSTTS
S
....SSGGG
GGGSSS
B


S
Template Predicted Secondary structure 













....















Template SS confidence 















































































   109110.........120.........130..... ....140.........150.........160.........170.........180....
 
   221........230.........240.........250.........260.........270...
Predicted Secondary structure 















Query SS confidence 




















































Query Sequence  EFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPK
Query Conservation   
        

 



  
      
  
             


     
 
Alig confidence 






















........





















Template Conservation            







     ........    
         






 
Template Sequence  NAEKLGNRFMLLIFDEVHHLPAE. . . . . . . . SYVQIAQMSIAPFRLGLTATFE
Template Known Secondary structure  TTTT
S
SS


TT........TT


SS

Template Predicted Secondary structure 









........








Template SS confidence 




















































   185....190.........200....... ..210.........220.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions