Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence99.90%DateThu Jan 5 10:57:49 GMT 2012
Rank17Aligned Residues226
% Identity20%Templated2ce7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160. ........170.........180.........190.........200.....
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Query Sequence  NVKHTFDNFVEGKSNQLARAAARQVADNP. . . . . . . GGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSER
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Template Sequence  NKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEA. . . . . NVPFFHISGSD
Template Known Secondary structure  S



GGG

S

TTTT



S

TTSS.....T

GGG
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   155....160.........170.........180.........190.........200.........210........ .220.........
 
   206...210.........220.........230 .........240....... ..250.........260.........270.........280.
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Query Sequence  FVQDMVKALQNNAIEEFKRYYRSVD. ALLIDDIQFFANKERSQ. . . EEFFHTFNALLEGNQQIILTSDRYPKEINGVEDR
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Template Sequence  FVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDI. . . LDPA
Template Known Secondary structure  TTT

TTT
STGGGT



S
GGGTS
GGG...S
GG
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   230.........240.........250.........260.........270.........280.........290.........300.. ....
 
   282.......290.........300.........310.........320.........330. ........340.........350... ......
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Query Sequence  LKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRS. NVRELEGALNRVIANANFTGRA. ITIDFV
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Template Sequence  LLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVN. LEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDF
Template Known Secondary structure  GGSTTSS





TTS
B
TT

.T
TT

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SSB
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   316...320.........330.........340.........350.... .....360.........370.........380.........390....
 
   360.......
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Query Sequence  REALRDLL
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Template Sequence  EEAIDRVI
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   395....400..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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