Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence99.84%DateThu Jan 5 10:57:49 GMT 2012
Rank35Aligned Residues224
% Identity14%Templated1sxjc2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSE
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Template Sequence  NLPWVEKYRPE. TLDEVYG. . . QNEVITTVRKFVDE. . GKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNAS
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T

S.SGGG

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T..T




SSSSSTTS
TT
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Query Sequence  RFVQDMVKALQNNAIEEFKRYYRSVD. ALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLK
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Template Sequence  DDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAM. . . TNAAQNALRRVIERYTKNTRFCVLANYA. . . . HKLTPALL
Template Known Secondary structure  S

STS

SSS
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TTGGGS...
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   86...90.........100.........110.........120.. .......130.........140.........150 ........
 
   284.....290.........300.........310.........320.........330.........340.........350... ......360..
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Query Sequence  SRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRA. ITIDFVREA
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Template Sequence  SQCT. . . RFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYEC
Template Known Secondary structure  TTS...




TTT

B
TT
TTTTTTTT
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   159160.. .......170.........180.........190.........200.........210.........220.........230.....
 
   363.
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Query Sequence  LR
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Template Sequence  CG
Template Known Secondary structure  TT
Template Predicted Secondary structure 
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   236.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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