Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence99.85%DateThu Jan 5 10:57:49 GMT 2012
Rank33Aligned Residues225
% Identity14%Templated1sxja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150....... ..160.........170.........180.........190.........200
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Query Sequence  NVKHTFDNFVEGKSNQLARAAARQV. . . . . . . . . . . . ADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVY
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Template Sequence  YAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASD
Template Known Secondary structure  T

SSGGG

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TTTT



TTSTTS
S
STTSSTT

TTS
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   302.......310.........320.........330.........340.........350.........360.........370.........380.
 
   201........210.........220.........230 .........240.........250.........260.........270......
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Query Sequence  MHSERFVQDMVKALQNNAIEEFKRYYRSVD. . . . ALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
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Template Sequence  VRSKTLLNAGVKNALDNMSVVGYFKHQNLNGKHFVIIMDEVDGMS. . GGDRGGVGQLAQFCRKTSTPLILICNERNLP. .
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TGGGGTT


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SGGG

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   382.......390.........400.........410.........420...... ...430.........440.........450.......
 
   277..280.........290.........300.........310.........320.........330.........340.........350......
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Query Sequence  GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITI
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Template Sequence  . KMRPFDRVCL. . . DIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLS. . . . TISTTTKTINH
Template Known Secondary structure  .TTGGGTTTS...




T



TTTTT
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   462.......470. ........480.........490.........500.........510.........520.. .......530...
 
   357..360.........
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Query Sequence  DFVREALRDLLAL
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Template Sequence  ENINEISKAWEKN
Template Known Secondary structure  TTT
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   534.....540......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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