|   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | H | T | F | D | N | F | V | E | G | K | S | N | Q | L | A | R | A | A | A | R | Q | V | A | D | N | . |
. |
. |
. |
. |
. |
. |
. |
P | G | G | A | Y | N | P | L | F | L | Y | G | G | T | G | L | G | K | T | H | L | L | H | A | V | G | N | G | I | M | A | R | K | P | N | A | K | V | V | Y | M | H | S | E | R |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | Q | V | T | W | E | D | I | G | G | L | E | D | V | K | R | E | L | Q | E | L | V | Q | Y | P | V | E | H | P | D | K | F | L | K | F | G | M | T | P | S | K | G | V | L | F | Y | G | P | P | G | C | G | K | T | L | L | A | K | A | I | A | N | E | C | . |
. |
. |
. |
. |
Q | A | N | F | I | S | I | K | G | P | E |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
| S | S | T |  |  |  |  |  |  |  | T | T | T | S | S | S | S |
|
| S | S | S | S | S | S | S |
| T | T | T | T |
| S | S |
| S |
| B |
| S | S | S | S | S |
|  |  |  |  | T | T |  |  |  |  | S | . | . | . | . | . | S |
| S | T | T | T |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
472 | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 540 | . | . | . | . | . | . |
  |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | V | Q | D | M | V | K | A | L | Q | N | N | A | I | E | E | F | K | R | Y | Y | R | S | . |
V | D | A | L | L | I | D | D | I | Q | F | F | A | N | K | E | R | S | Q | E | E | F | F | H | T | F | N | A | L | L | E | G | N | Q | Q | I | I | L | T | S | D | R | Y | P | K | E | I | N | G | V | E | D | R | L | K | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |   |   |
|
|   |
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|
Template Sequence |   |
L | L | T | M | W | F | G | E | S | E | A | N | V | R | E | I | F | D | K | A | R | Q | A | A | P | C | V | L | F | F | D | E | L | D | S | I | A | K | A | D | R | V | I | N | Q | I | L | T | E | M | D | G | M | S | T | K | K | N | V | F | I | I | G | A | T | N | R | P | D | I | . |
. |
. |
I | D | P | A | I | L | R |
Template Known Secondary structure |   |
| S | T | G | G | G | T |
|
|
|
|
| T | T | T | T |
|
|
|
| T | T | T | S | S | S |
|
|
|
|
|
|
|
| T | T | T | T |
|
|
| S | S |
|  |  |  |  |  |  | T | T |
|
| S |
|
|
|
|
|
|
|
| S | S |
|
|
|
|
| . | . | . | S | G | G | G |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
547 | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | |
|
|
. | . | . | 620 | . | . | . |
  |
  |   |
285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | |
. | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | G | W | G | L | T | V | A | I | E | P | P | E | L | E | T | R | V | A | I | L | M | K | K | A | D | E | N | D | I | R | L | P | G | E | V | A | F | F | I | A | K | R | L | R | S | . |
N | V | R | E | L | E | G | A | L | N | R | V | I | A | N | A | N | F | T | G | R | A | I | T | I | D | F | V | R | E | A | L |
Query Conservation |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   | . |   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
P | G | R | L | D | Q | L | I | Y | I | P | L | P | D | E | K | S | R | V | A | I | L | K | A | N | L | R | K | S | P | V | A | . |
K | D | V | D | L | E | F | L | A | K | M | T | N | G | F | S | G | A | D | L | T | E | I | C | Q | R | A | C | K | L | A | . |
I | R | E | S | I | E | R | R | D | H | F | E | E | A | M |
Template Known Secondary structure |   |
S |
|
|
|
|
| B |
|
|
|
| S | S | G | G | G | T |  |  |  |  | T |
|
|
|
| S | S | T | T | T |
| . | S | S | S |
| T | T | T | T | T |
|
|
|
| S | S |
| S | T | T |  |  |  |  |  |  |  |  | T | T |
|
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
636 | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | |
. | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | |
. | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . |
  |
  |   |
364 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
R |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
R |
Template Known Secondary structure |   |
T |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
741 |
  |