Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence99.62%DateThu Jan 5 10:57:49 GMT 2012
Rank70Aligned Residues207
% Identity18%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   158.160.........170.........180.........190.........200......... 210.........220.........
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Query Sequence  ADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQD. MVKALQNNAIEEFKRYYRSV. . . . . . .
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Template Sequence  PLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . . . NAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQN
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TTSS.....T

GGGGSS

SGGGSTTTTTT
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   43......50.........60.........70.... .....80.........90.........100.........110.......
 
   230.........240... ......250.........260.. .......270.........280.........290
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Query Sequence  DALLIDDIQFFANK. . . . . . . . . . ERSQEEFFHTFNALLEGNQ. . . . . . . . . QIILTSDRYPKEINGVEDRLKSRFGWGL
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Template Sequence  GIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPI. .
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GGGGS

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   252.......260.........270.........280.........290.........300.........310.........320.........
 
   291........300....... ..310.........320........ .330.........340.........
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Query Sequence  TVAIEPPELETRVAILM. . . . . . . . . . . . . KKADENDIRLPGEVAFFIAKR. . . . . . . . LRSNVRELEGALNRVIANANF
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Template Conservation                
       
                     
  
                
 
   
         
Template Sequence  RVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISF
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   330.........340.........350.........360.........370.........380.........390.........400.........
 
   350... ......360.........370.
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Query Sequence  TGRA. . . . . . . ITIDFVREALRDLLALQE
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Template Sequence  SASDMNGQTVNIDAAYVADALGEVVENED
Template Known Secondary structure  GGG
TT

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SSSS


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   410.........420.........430........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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