Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence97.28%DateThu Jan 5 10:57:49 GMT 2012
Rank221Aligned Residues107
% Identity18%Templated1gl9b1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Helicase-like "domain" of reverse gyrase
Resolution3.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190.........200.........210.........220
Predicted Secondary structure 


















........................
Query SS confidence 























































. . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  YNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIE. . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     


 
  
 


 

 


                                  ........................
Alig confidence 




























.

























........................
Template Conservation      

 



 


       
      .   


 

  
  
    
                              
Template Sequence  KESFAATAPTGVGKTSFGLAMSLFLALKG. KRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENF
Template Known Secondary structure  T




TTS
TTT.

SSTTT



TTT
S


Template Predicted Secondary structure 









.














Template SS confidence 















































































   71........80.........90......... 100.........110.........120.........130.........140.........
 
   221........230.........240.........250.... .....260.........270..
Predicted Secondary structure  ..................









.........





Query SS confidence  . . . . . . . . . . . . . . . . . .

































. . . . . . . . .

















Query Sequence  . . . . . . . . . . . . . . . . . . EFKRYYRSVDALLIDDIQFFANKERSQEEFFHTF. . . . . . . . . NALLEGNQQIILTSDRYP
Query Conservation  .................. 
        

 



  
      
  
    .........         


     
Alig confidence  ..................

































.........

















Template Conservation          
                    




 
 
             

                 

  


  
Template Sequence  MQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKNVDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAK
Template Known Secondary structure  TTTTS
SSSSS


SS
STST


BTTTTB





S
BSS
Template Predicted Secondary structure 
































Template SS confidence 














































































   150.........160.........170.........180.........190.........200.........210.........220........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions