Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence99.19%DateThu Jan 5 10:57:49 GMT 2012
Rank94Aligned Residues226
% Identity20%Templated1e94e_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150......... 160.........170.........180.........190.........200......
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Query Sequence  FDNFVEGKSNQLARAAARQVAD. . . . . . . . . . . NPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERF
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Template Sequence  LDKHIIGQDNAK. RSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . . . NAPFIKVEATKF
Template Known Secondary structure  TT

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.TS







TTSSTTT.....T

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   13......20.... .....30.........40.........50.........60.........70.... .....80......
 
   207.. 210.......
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Query Sequence  VQD. MVKALQNN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREG
Template Known Secondary structure  GGGGTS


TTTTTTTTSSSTTTS


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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   218.220.........230.........240. ........250....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AIEEFKRYYRSVDALLIDDIQFFA. . . . . . NKERSQEEFFHTF
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Template Sequence  QLDDKEIEKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDL
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   255.... 260.........270.........280.........290.........300...... ...310
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Query Sequence  NALLE. . . . . . . . . . . . . GNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAIL. . . . . . . . . . . MKKA
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Template Sequence  LPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPI. . RVELQALTTSDFERILTEPNASITVQYKALM
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TTGGG


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   282.......290.........300.........310.........320........ .330.........340.........350.........
 
   311...... ..320........ .330.........340.........350 ... ......360.........370.
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Query Sequence  DENDIRL. . PGEVAFFIAKR. . . . . . . . LRSNVRELEGALNRVIANANFT. . . . . GRA. . ITIDFVREALRDLLALQE
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Template Sequence  ATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADED
Template Known Secondary structure  TT

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   360.........370.........380.........390.........400.........410.........420.........430.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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