Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence99.79%DateThu Jan 5 10:57:49 GMT 2012
Rank48Aligned Residues221
% Identity18%Templated1e32a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150....... ..160.........170.........180.........190.........200........
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Query Sequence  TFDNFVEGKSNQLARAAARQV. . . . . . . . ADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQ
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Template Sequence  GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET. . . . . GAFFFLINGPEIMS
Template Known Secondary structure 
GGG

S
S









TTSST.....T

TT
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   202.......210.........220.........230.........240.........250.........260.. .......270......
 
   209210.........220.........230 .........240.... .....250.........260.........270........
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Query Sequence  DMVKALQNNAIEEFKRYYRSVD. ALLIDDIQFFANKE. . . . . . . . . RSQEEFFHTFNALLEGNQQIILTSDRYPKEINGV
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Template Sequence  KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNS. . . I
Template Known Secondary structure  S
TTT
SSSGGGT




TTT


SS
S
GGG...S
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   277..280.........290.........300.........310.........320.........330.........340.........350.. .
 
   279280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  EDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANF. . . . . . . . .
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Template Sequence  DPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE
Template Known Secondary structure 
GGGTSTTSS





TTTTS
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   354.....360.........370.........380.........390.........400.........410.........420.........430...
 
   350.........360.....
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Query Sequence  . . . . . . . . . TGRAITIDFVREALRD
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Template Sequence  DETIDAEVMNSLAVTMDDFRWALSQ
Template Known Secondary structure  SS




B
T
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   434.....440.........450........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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