Job Description P03004 Confidence 99.71% Date Thu Jan 5 10:57:49 GMT 2012 Rank 58 Aligned Residues 188 % Identity 20% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	A	A	R	Q	V	A	D	N	P	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V
Query Conservation
Alig confidence																																													.	.									.	.	.	.																				.	.
Template Conservation																																													.	.									.	.	.	.																				.	.
Template Sequence		A	V	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	.	.	E	E	S	M	I	R	I	D	.	.	.	.	M	S	E	Y	M	E	K	H	S	T	S	L	T	E	K	V	R	R	K	.	.	P	Y
Template Known Secondary structure							T	T	T		S		T	T	S		S							S		T	T	S	S														S		.	.	T	T							.	.	.	.	G	G	G	G		S	S													.	.	S	S
Template Predicted Secondary structure																																													.	.									.	.	.	.																				.	.
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.			.	.	.	.	570	.	.	.					.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.			.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																.	.	.	.	.																													.	.	.	.
Query SS confidence																																.	.	.	.	.																													.	.	.	.
Query Sequence		D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	.	.	.	.	.	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R	F	G	.	.	.	.	W	G	L	T	V	A	I	E	P	P	E	L	E
Query Conservation																																.	.	.	.	.																													.	.	.	.
Alig confidence														.	.																	.	.	.	.	.																													.	.	.	.
Template Conservation														.	.
Template Sequence		S	V	V	L	L	D	A	I	E	K	A	H	.	.	P	D	V	F	N	I	L	L	Q	V	L	E	D	G	R	L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	G	A	S	E	K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R	I	D	E	I	I	V	F	H	E	K	K
Template Known Secondary structure		S							G	G	G	S		.	.														S	B					B		T	T								S	S	S	T	T													S						T	T	S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.			.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.										.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		T	R	V	A	I	L	M	K	K	A	D	E	N	.	.	.	.	.	.	.	.	.	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	.	.	.	L	R	S	N	V	R	E	L	E	G	A	L	N	R	V	I	A	N	A
Query Conservation															.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		H	L	T	E	I	V	S	L	M	S	D	Q	L	T	K	R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P	L	R	R	A	I	Q	K	H	V	E	D	R
Template Known Secondary structure																				T	T	T															G	G	G			T	T	T	T	T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		718	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions