Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence99.89%DateThu Jan 5 10:57:49 GMT 2012
Rank24Aligned Residues203
% Identity18%Templatec3pvsA_
PDB info PDB header:recombinationChain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170.........180.........190.........200.........210......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  TFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQN
Query Conservation 


    
  
  
                 


 
  
 


 

 


                              
Alig confidence 




























..













































...
Template Conservation   
 




         
   
      
..


 










  

      

 


    
  

 

  
...
Template Sequence  NLAQYIGQQHLLAAGKPLPRAIEAGHLHS. . MILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERA. . .
Template Known Secondary structure  STTT

S
STTST


..
STTSSTT
TTT

...
Template Predicted Secondary structure 







..














...
Template SS confidence 















































































   24.....30.........40.........50.. .......60.........70.........80.........90........
 
   217..220.........230.........240.........250.........260.........270.........280.........290......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  NAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEP
Query Conservation       
        

 



  
      
  
             


     
     
   
 

    
   
  
Alig confidence  ....



















............























.









...





Template Conservation  ....          






 

............


  

   



 




    .
  

 

  ...

 
  
Template Sequence  . . . . RQNRNAGRRTILFVDEVHRF. . . . . . . . . . . . AFLPHIEDGTITFIGATTENPSFE. LNSALLSRAR. . . VYLLKS
Template Known Secondary structure  ....TT

TTT

............

TTS
SS
GGGS.S
TT...


Template Predicted Secondary structure  ....





............






.

...

Template SS confidence 















































































   99100.........110........ .120.........130.........140.. .......150.. ......
 
   297..300.........310... ......320.........330.........340.........350... ......360....
Predicted Secondary structure 


.......












...

Query SS confidence 
















. . . . . . .







































. . .










Query Sequence  PELETRVAILMKKADEN. . . . . . . DIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRA. . . ITIDFVREALR
Query Conservation 
    
  

       ....... 
    
 
  

      

 
   
  
   
      ...

   
   
 
Alig confidence 
















.......







































...










Template Conservation 

 


  

   
           
 
 
 

  

  
 

 
 


 

 
   
         
    
     
Template Sequence  LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG
Template Known Secondary structure 


TTTSSTTSS


S
S
B
TTS


T
Template Predicted Secondary structure 






















Template SS confidence 













































































   165....170.........180.........190.........200.........210.........220.........230.........240..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions