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Job DescriptionP03004
Confidence99.09%DateThu Jan 5 10:57:49 GMT 2012
Rank96Aligned Residues203
% Identity15%Templatec3m6aC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.... .....170.........180.........190.........200.........210.......
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Query Sequence  DNFVEGKSNQLARAAARQVADNPGGA. YNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNN
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Template Sequence  EEHHGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSL. . . . . GRKFVRISLG. . . . . . . . . . . GR
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   320.........330.........340.........350.........360.........370. ........380. ..
 
   218.220.........230.........240..... ....250.........260.........270.........280.........290.
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Query Sequence  AIEEFKRYYRSVDALLIDDIQFFANKER. . . . . . SQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLT
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Template Sequence  IIQGMKKAGKLNPVFLLDEIDKMSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLAT. . . IPGPLRDRME. . . I
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   404.....410.........420.........430.........440.........450.........460...... ...470...... .
 
   292.......300.........310 .........320.........330 .........340......... 350..
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Query Sequence  VAIEPPELETRVAILMKKA. . . . . . . . . . DENDIRLPGEVAFFIAKRLR. . SNVRELEGALNRVIANANF. . . . . . . TGR
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Template Sequence  INIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRI
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   487..490.........500.........510.........520.........530.........540.........550.........560......
 
   353......360...
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Query Sequence  AITIDFVREAL
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Template Sequence  TVTEKNLQDFI
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   567..570.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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