Job Description P03004 Confidence 99.09% Date Thu Jan 5 10:57:49 GMT 2012 Rank 96 Aligned Residues 203 % Identity 15% Template c3m6aC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain Resolution 3.40 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		D	N	F	V	E	G	K	S	N	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	G	G	A	.	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N
Query Conservation																												.
Alig confidence																												.																										.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	H	H	G	L	E	K	V	K	E	R	I	L	E	Y	L	A	V	Q	K	L	T	K	S	L	K	G	P	I	L	C	L	A	G	P	P	G	V	G	K	T	S	L	A	K	S	I	A	K	S	L	.	.	.	.	.	G	R	K	F	V	R	I	S	L	G	.	.	.	.	.	.	.	.	.	.	.	G	R
Template Known Secondary structure					S	S																		S	S	S			S							S	S	S	S	S	S													.	.	.	.	.	T										.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.						.	.	.	.	.	.	.	.	380	.												.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		A	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	.	.	.	.	.	.	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R	F	G	W	G	L	T
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.																														.	.	.											.	.	.
Template Conservation																																																																	.	.	.											.	.	.
Template Sequence		I	I	Q	G	M	K	K	A	G	K	L	N	P	V	F	L	L	D	E	I	D	K	M	S	A	M	L	E	V	L	D	P	E	Q	N	S	S	F	S	D	H	Y	I	E	E	T	F	D	L	S	K	V	L	F	I	A	T	A	N	N	L	A	T	.	.	.	I	P	G	P	L	R	D	R	M	E	.	.	.	I
Template Known Secondary structure								T	T		S	S	S								S	S	S					G	G	G	T		T	T	T	T	T	B				S	S	S					B		S	S								S	S	T	T	T	.	.	.	S										.	.	.
Template Predicted Secondary structure																																																																	.	.	.											.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.				.	.	.	470	.	.	.	.	.	.				.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310											.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.								350	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.
Query Sequence		V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	.	.	.	.	.	.	.	.	.	.	D	E	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	.	.	S	N	V	R	E	L	E	G	A	L	N	R	V	I	A	N	A	N	F	.	.	.	.	.	.	.	T	G	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	I	A	G	Y	T	E	I	E	K	L	E	I	V	K	D	H	L	L	P	K	Q	I	K	E	H	G	L	K	K	S	N	L	Q	L	R	D	Q	A	I	L	D	I	I	R	Y	Y	T	R	E	A	G	V	R	S	L	E	R	Q	L	A	A	I	C	R	K	A	A	K	A	I	V	A	E	E	R	K	R	I
Template Known Secondary structure																			T									T				G	G	G																			S	S	S																				T	T			S
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	I	D	F	V	R	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	T	E	K	N	L	Q	D	F	I
Template Known Secondary structure					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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