Job Description P03004 Confidence 97.29% Date Thu Jan 5 10:57:49 GMT 2012 Rank 219 Aligned Residues 154 % Identity 16% Template c3exaD_ PDB info PDB header:transferase Chain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41. Resolution 2.30 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	.	.	K
Query Conservation																																																																															.	.
Alig confidence																										.	.	.	.	.										.	.	.	.																																				.	.
Template Conservation																										.	.	.	.	.										.	.	.	.
Template Sequence		K	L	V	A	I	V	G	P	T	A	V	G	K	T	K	T	S	V	X	L	A	K	R	L	.	.	.	.	.	N	G	E	V	I	S	G	D	S	.	.	.	.	X	Q	V	Y	R	G	X	D	I	G	T	A	K	I	T	A	E	E	X	D	G	V	P	H	H	L	I	D	I	K	D	P	S	E	S	F	S	V
Template Known Secondary structure										T	T	S	S											T	T	.	.	.	.	.	T								T	.	.	.	.	T	T	T	B	T	T			T	T	T	T								T	T					S	S	S		B		T	T	S
Template Predicted Secondary structure																										.	.	.	.	.										.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.									.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.
Query Sequence		E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	.	.	.	.	.	.	.	.	I
Query Conservation																																																																									.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.													.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.													.	.	.	.	.
Template Sequence		A	D	F	Q	D	L	A	T	P	L	I	T	E	I	H	E	R	G	R	L	P	F	L	V	G	G	T	.	.	.	.	.	G	L	Y	V	N	A	V	I	H	Q	F	N	.	.	.	.	.	L	G	D	I	R	A	D	E	D	Y	R	H	E	L	E	A	F	V	N	S	Y	G	V	Q	A	L	H	D	K	L	S
Template Known Secondary structure																		T	T										.	.	.	.	.									T	T			.	.	.	.	.																					S
Template Predicted Secondary structure																													.	.	.	.	.													.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	S	N	V	R	E	L	E	G	A	L	N
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		K	I	D	P	K	A	A	A	A	I	.	.	.	H	P	N	N	Y	R	R	V	I	R	A	L	E
Template Known Secondary structure		T	S						T	T	S	.	.	.		T	T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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