Job Description P03004 Confidence 96.14% Date Thu Jan 5 10:57:49 GMT 2012 Rank 400 Aligned Residues 104 % Identity 24% Template c3e2iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from s. aureus Resolution 2.01 Å

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		169	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		F	L	Y	G	G	T	G	L	G	K	T	H	.	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q
Query Conservation														.
Alig confidence														.													.	.																																																		.	.	.	.
Template Conservation																											.	.																																																		.	.	.	.
Template Sequence		C	I	T	G	S	X	F	S	G	K	S	E	E	L	I	R	R	L	R	R	G	I	Y	A	K	.	.	Q	K	V	V	V	F	K	P	A	S	H	N	G	N	A	I	E	A	I	N	I	S	K	A	S	E	I	X	T	H	D	L	T	N	V	D	V	I	G	I	D	E	V	Q	F	F	D	D	E	.	.	.	.
Template Known Secondary structure							T	T	S																T	T	.	.											B	T	T	B								S	S	G	G	G	G	G	G	S			T	T		S							G	G	G	S		T		.	.	.	.
Template Predicted Secondary structure																											.	.																																																		.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	I	V	S	I	V	E	K	L	S	A	D	G	H	R	V	I	V	A	G	L	D	X	D	F	R	G	E	P	F	E	P
Template Known Secondary structure		.	.											T	T									S	B		T	T	S		B		T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions