Job Description P03004 Confidence 99.89% Date Thu Jan 5 10:57:49 GMT 2012 Rank 22 Aligned Residues 236 % Identity 13% Template c3d8bB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:fidgetin-like protein 1; PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp Resolution 2.00 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		N	V	K	H	T	F	D	N	F	V	E	G	K	S	N	Q	L	A	R	A	A	A	R	Q	V	A	.	.	.	.	.	.	.	D	N	P	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																																.	.	.	.	.											.
Template Conservation																																																																		.	.	.	.	.											.
Template Sequence		G	P	P	V	N	W	E	D	I	A	G	V	E	F	A	K	A	T	I	K	E	I	V	V	W	P	M	L	R	P	D	I	F	T	G	L	R	G	P	P	K	G	I	L	L	F	G	P	P	G	T	G	K	T	L	I	G	K	C	I	A	S	Q	S	.	.	.	.	.	G	A	T	F	F	S	I	S	A	S	.
Template Known Secondary structure		S					G	G	G	S		S												T							T	T	T	S		T	T	S	S			S						S	S	T	T	S	S													.	.	.	.	.	T								G	G	.
Template Predicted Secondary structure																																																																		.	.	.	.	.											.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.						.	460	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	.	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S
Query Conservation																											.
Alig confidence		.	.	.	.																						.																										.	.																		.	.	.
Template Conservation		.	.	.	.																																																.	.																		.	.	.
Template Sequence		.	.	.	.	S	L	T	E	G	E	K	M	V	R	A	L	F	A	V	A	R	C	Q	Q	P	A	V	I	F	I	D	E	I	D	S	L	L	S	S	R	R	I	K	T	E	F	L	V	Q	L	D	.	.	G	A	E	D	R	I	L	V	V	G	A	T	N	R	P	Q	E	.	.	.	I	D	E	A	A	R	R
Template Known Secondary structure		.	.	.	.	G	G																	T		S							T	T																			.	.													S		G	G	G	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																.	.																		.	.	.
Template SS confidence
						469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.			.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.				.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.												.	350	.	.
Predicted Secondary structure																																																	.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	S	.	N	V	R	E	L	E	G	A	L	N	R	V	I	A	N	A	N	.	.	.	.	.	.	.	.	.	.	.	F	T	G	R
Query Conservation																																																	.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																																										.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		R	L	V	K	.	.	R	L	Y	I	P	L	P	E	A	S	A	R	K	Q	I	V	I	N	L	M	S	K	E	Q	C	C	L	S	E	E	E	I	E	Q	I	V	Q	Q	S	D	A	F	S	G	A	D	M	T	Q	L	C	R	E	A	S	L	G	P	I	R	S	L	Q	T	A	A	T	I	T	P	D	Q	V	R
Template Known Secondary structure			S			.	.																					T	T	S		B														T	T	T																													G	G	G	S
Template Predicted Secondary structure						.	.
Template SS confidence
		558	.	560	.			.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	I	D	F	V	R	E	A	L	R	D	L	L	A	L	Q	E	K	L	V	T	I	D	N	I	Q	K	T	V	A	E	Y
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		P	I	A	Y	I	D	F	E	N	A	F	R	T	V	R	P	S	V	S	P	K	D	.	L	E	L	Y	E	N	W	N	K	T	F
Template Known Secondary structure			B													G	G	G						.
Template Predicted Secondary structure																								.
Template SS confidence
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.		660	.	.	.	.	.	.	.	.	.	670

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions