Job Description P03004 Confidence 100.00% Date Thu Jan 5 10:57:49 GMT 2012 Rank 4 Aligned Residues 223 % Identity 25% Template c3bosA_ PDB info PDB header:hydrolase regulator,dna binding protein Chain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution Resolution 1.75 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	R	S	N	V	N	V	K	H	T	F	D	N	F	V	E	G	K	S	N	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R	F
Query Conservation
Alig confidence																							.	.											.	.																																.	.									.	.	.	.
Template Conservation																							.	.											.	.																																.	.									.	.	.	.
Template Sequence		S	L	P	V	H	L	P	D	D	E	T	F	T	S	Y	Y	P	G	N	D	E	.	.	L	I	G	A	L	K	S	A	A	S	.	.	G	D	G	V	Q	A	I	Y	L	W	G	P	V	K	S	G	R	T	H	L	I	H	A	A	C	A	R	A	N	E	L	.	.	E	R	R	S	F	Y	I	P	.	.	.	.
Template Known Secondary structure									T	T		S	T	T	T	S							.	.											.	.	T		S		S							S	T	T	S	S															T	.	.	T								.	.	.	.
Template Predicted Secondary structure																							.	.											.	.																																.	.									.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	.	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R
Query Conservation																																																										.
Alig confidence		.	.	.	.	.																																																				.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	G	I	H	A	S	I	S	T	A	L	L	E	G	L	E	Q	F	D	L	I	C	I	D	D	V	D	A	V	A	G	H	P	L	W	E	E	A	I	F	D	L	Y	N	R	V	A	E	Q	K	R	G	S	L	I	V	S	A	S	A	S	P	X	E	A	G	F	V	L	P	D	L	V	S	R
Template Known Secondary structure		.	.	.	.	.	G	G	G	G	G	G	S		G	G	G	G	T	T	G	G	G	S	S						T	G	G	G	G	T	T																				S								S	S		T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	S	N	V	R	E	L	E	G	A	L	N	R	V	I	A	N	A	N	F	T	G	R	A	I	T	I	D	F	V	R	E	A	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	H	W	G	L	T	Y	Q	L	Q	P	X	X	D	D	E	K	L	A	A	L	Q	R	R	A	A	X	R	G	L	Q	L	P	E	D	V	G	R	F	L	L	N	R	X	A	R	D	L	R	T	L	F	D	V	L	D	R	L	D	K	A	S	X	V	H	Q	R	K	L	T	I	P	F	V	K	E	X	L	R
Template Known Secondary structure					S										G	G	G												T	T															T	T	T																				T													T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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