Job Description P03004 Confidence 96.39% Date Thu Jan 5 10:57:49 GMT 2012 Rank 376 Aligned Residues 63 % Identity 19% Template c2wp0C_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of a hoba-dnaa (domain i-ii) complex from2 helicobacter pylori. Resolution 2.67 Å

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		8	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure											.	.																.	.	.
Query SS confidence											.	.																.	.	.
Query Sequence		Q	C	L	A	R	L	Q	D	E	.	.	L	P	A	T	E	F	S	M	W	I	R	P	L	Q	A	.	.	.	E	L	S	D	N	T	L	A	L	Y	A	P	N	R	F	V	L	D	W	V	R	D	K	Y	L	N	N	I	N	G	L	L	T	S	F	C	G	A	D
Query Conservation											.	.																.	.	.
Alig confidence											.	.																.	.	.
Template Conservation
Template Sequence		E	I	L	A	L	V	K	Q	N	P	K	V	S	L	I	E	Y	E	N	Y	F	S	Q	L	K	Y	N	P	N	A	S	K	S	D	I	A	F	F	Y	A	P	N	Q	V	L	C	T	T	I	T	A	K	Y	G	A	L	L	K	E	I	L	S	Q	N	K	G	M	H
Template Known Secondary structure		G							T		T	T									T	G	G	G					S	S	S			S	S							S	S																					T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions